Strain Fitness in Pseudomonas simiae WCS417 around PS417_13390

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,943,220	+		PS417_13385	0.35	+0.2
2,943,221	-		PS417_13385	0.35	-2.1
2,943,230	+		PS417_13385	0.36	-0.2
2,943,230	+		PS417_13385	0.36	-1.0
2,943,230	+		PS417_13385	0.36	+0.2
2,943,231	-		PS417_13385	0.36	+1.3
2,943,231	-		PS417_13385	0.36	-1.6
2,943,234	+		PS417_13385	0.36	-2.2
2,943,234	+		PS417_13385	0.36	-0.7
2,943,235	-		PS417_13385	0.36	+1.8
2,943,235	-		PS417_13385	0.36	-0.2
2,943,255	+		PS417_13385	0.38	-0.4
2,943,442	-		PS417_13385	0.51	+0.5
2,943,442	-		PS417_13385	0.51	-0.3
2,943,740	+		PS417_13385	0.72	-0.7
2,943,802	-				-0.8
2,943,802	-		PS417_13385	0.77	-1.2
2,944,181	+				-0.1
2,944,182	-				-2.3
2,944,292	+		PS417_13390	0.12	-0.3
2,944,323	-		PS417_13390	0.14	+2.0
2,944,346	+		PS417_13390	0.16	-1.1
2,944,347	-		PS417_13390	0.16	+0.2
2,944,347	-				+1.4
2,944,594	+		PS417_13390	0.33	+0.0
2,944,594	+		PS417_13390	0.33	+0.9
2,944,595	-		PS417_13390	0.33	-1.3
2,944,595	-		PS417_13390	0.33	+1.8
2,944,595	-		PS417_13390	0.33	+0.6
2,944,634	+		PS417_13390	0.36	+0.4
2,944,659	+		PS417_13390	0.38	+0.3
2,944,681	-		PS417_13390	0.39	+2.8
2,944,938	-		PS417_13390	0.58	-0.2
2,945,085	-		PS417_13390	0.68	+0.7
2,945,085	-		PS417_13390	0.68	-0.0
2,945,232	+		PS417_13390	0.79	-0.0
2,945,294	+				+0.4
2,945,295	-		PS417_13390	0.83	+0.1
2,945,361	+		PS417_13390	0.88	-0.1
2,945,559	+				-0.5
2,945,637	-				-0.5
2,945,717	-				-2.3
2,945,719	+				-0.2
2,945,720	-				-0.4
2,945,720	-				+0.1
2,945,841	+		PS417_13395	0.12	+0.2
2,945,842	-		PS417_13395	0.12	-1.7
2,945,842	-		PS417_13395	0.12	-1.0
2,946,028	+		PS417_13395	0.24	-1.1
2,946,029	-		PS417_13395	0.24	-0.3
2,946,112	+		PS417_13395	0.29	+0.5
2,946,112	+		PS417_13395	0.29	-0.4
2,946,113	-				-1.2
2,946,113	-		PS417_13395	0.29	+0.5
2,946,263	-		PS417_13395	0.38	-0.4
2,946,274	+		PS417_13395	0.39	-1.5
2,946,274	+		PS417_13395	0.39	-0.8
2,946,274	+		PS417_13395	0.39	-0.3
2,946,274	+		PS417_13395	0.39	-0.6
2,946,274	+		PS417_13395	0.39	-2.8
2,946,274	+		PS417_13395	0.39	-1.7
2,946,275	-		PS417_13395	0.39	+0.3
2,946,275	-		PS417_13395	0.39	-0.8
2,946,275	-		PS417_13395	0.39	-0.2
2,946,275	-		PS417_13395	0.39	-1.5
2,946,275	-		PS417_13395	0.39	-1.3
2,946,497	-		PS417_13395	0.52	-0.5