Strain Fitness in Pseudomonas simiae WCS417 around PS417_12075

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,621,855	+				+0.7
2,621,855	+				-0.8
2,621,855	+				-0.5
2,621,856	-				+2.1
2,622,461	-				-0.6
2,622,530	-				+0.1
2,622,581	+				-1.0
2,622,581	+				-0.5
2,622,581	+				-0.4
2,622,582	-				+0.4
2,622,582	-				+0.2
2,622,584	+				+1.3
2,622,585	-				-0.4
2,622,834	-		PS417_12075	0.32	-2.3
2,622,981	-		PS417_12075	0.47	-0.8
2,622,981	-		PS417_12075	0.47	+0.7
2,622,981	-		PS417_12075	0.47	-1.9
2,622,997	+		PS417_12075	0.49	+0.2
2,622,997	+		PS417_12075	0.49	-0.2
2,622,998	-		PS417_12075	0.49	-2.4
2,622,998	-		PS417_12075	0.49	-1.1
2,622,998	-		PS417_12075	0.49	-1.3
2,623,046	+		PS417_12075	0.54	+0.6
2,623,046	+		PS417_12075	0.54	-0.4
2,623,047	-		PS417_12075	0.54	-0.5
2,623,183	+		PS417_12075	0.68	-0.4
2,623,184	-		PS417_12075	0.68	-3.5
2,623,262	+		PS417_12075	0.76	-0.8
2,623,429	+				+1.5
2,623,429	+				-1.2
2,623,562	+				-0.8
2,623,563	-				-0.8
2,623,641	+				+0.8
2,623,641	+				-0.5
2,623,641	+				-1.1
2,623,641	+				+1.1
2,623,641	+				-0.3
2,623,642	-				-1.3
2,623,953	+		PS417_12080	0.12	-0.0