Strain Fitness in Pseudomonas simiae WCS417 around PS417_10805

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,307,722	-		PS417_10800	0.58	-0.1
2,308,138	-				-0.6
2,308,138	-				-0.3
2,308,141	+				-0.2
2,308,141	+				-1.5
2,308,142	-				-0.2
2,308,142	-				+0.1
2,308,142	-				+1.7
2,308,142	-				+0.1
2,308,270	+				+0.2
2,308,270	+				-0.3
2,308,270	+				+0.1
2,308,270	+				-0.0
2,308,271	-				-0.2
2,308,271	-				+0.5
2,308,400	+				-0.4
2,308,401	-				-0.3
2,308,405	-				-0.0
2,308,405	-				-0.2
2,308,431	+				-1.0
2,308,431	+				-0.1
2,308,476	+				-0.4
2,308,477	-				-0.7
2,308,477	-				-1.1
2,308,480	+				-0.0
2,308,480	+				-1.6
2,308,481	-				+0.7
2,308,481	-				-0.4
2,308,581	+				-1.0
2,308,582	-				+1.0
2,308,678	-				-1.0
2,308,681	+				-1.2
2,308,681	+				+0.8
2,308,681	+				-0.0
2,308,682	-				+1.4
2,308,831	-				-0.9
2,308,831	-				+0.0
2,308,987	-		PS417_10805	0.14	-0.6
2,308,987	-		PS417_10805	0.14	+0.2
2,308,987	-		PS417_10805	0.14	+1.7
2,309,122	+		PS417_10805	0.20	+1.1
2,309,373	+				+0.7
2,309,373	+		PS417_10805	0.31	+1.7
2,309,488	-		PS417_10805	0.36	-1.1
2,309,530	-		PS417_10805	0.38	+0.7
2,309,535	-		PS417_10805	0.38	+0.2
2,309,543	+		PS417_10805	0.39	-1.3
2,309,543	+		PS417_10805	0.39	-0.3
2,309,544	-		PS417_10805	0.39	+0.2
2,309,677	+		PS417_10805	0.45	+1.0
2,309,677	+		PS417_10805	0.45	-2.4
2,309,677	+		PS417_10805	0.45	-0.5
2,309,678	-		PS417_10805	0.45	-0.3
2,309,745	-		PS417_10805	0.48	+1.0
2,309,745	-		PS417_10805	0.48	+0.1
2,310,070	+		PS417_10805	0.62	+0.4
2,310,071	-				-0.9
2,310,423	+		PS417_10805	0.78	-0.3
2,310,454	+		PS417_10805	0.80	-0.8
2,310,926	+				+0.1
2,310,947	+				+1.3
2,311,005	+				+0.6
2,311,005	+				-2.6
2,311,107	+		PS417_10810	0.16	-1.6
2,311,107	+				-0.2
2,311,108	-		PS417_10810	0.17	+3.9
2,311,259	+		PS417_10810	0.73	+0.2
2,311,340	-				-2.5
2,311,457	-				-0.5
2,311,550	+				+1.7
2,311,550	+				+0.8
2,311,560	+				+0.7
2,311,560	+				-0.2
2,311,561	-				-1.2
2,311,592	+				+0.5
2,311,593	-				-0.5
2,311,904	-		PS417_10815	0.41	-0.7