Strain Fitness in Pseudomonas simiae WCS417 around PS417_10085

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,162,812	-		PS417_10080	0.32	-2.0
2,162,812	-		PS417_10080	0.32	-0.0
2,162,832	-		PS417_10080	0.34	-0.2
2,162,953	-		PS417_10080	0.42	-0.1
2,162,953	-		PS417_10080	0.42	+0.2
2,163,094	+		PS417_10080	0.52	-0.9
2,163,095	-		PS417_10080	0.52	-0.6
2,163,221	-		PS417_10080	0.61	-2.3
2,163,235	+		PS417_10080	0.62	+0.7
2,163,473	-		PS417_10080	0.79	-0.8
2,163,473	-				-1.1
2,163,473	-		PS417_10080	0.79	-0.5
2,163,473	-		PS417_10080	0.79	-0.3
2,163,502	+		PS417_10080	0.81	+0.2
2,163,502	+		PS417_10080	0.81	-2.8
2,163,640	+				-0.6
2,163,640	+				+0.4
2,163,971	+		PS417_10085	0.20	-0.7
2,163,971	+		PS417_10085	0.20	+0.8
2,163,985	-		PS417_10085	0.22	-1.5
2,164,087	+		PS417_10085	0.31	+0.5
2,164,087	+		PS417_10085	0.31	-0.4
2,164,088	-		PS417_10085	0.31	-0.0
2,164,214	-		PS417_10085	0.43	-0.1
2,164,214	-		PS417_10085	0.43	+0.0
2,164,214	-		PS417_10085	0.43	-0.1
2,164,217	-		PS417_10085	0.43	-0.4
2,164,217	-		PS417_10085	0.43	-0.2
2,164,597	-		PS417_10085	0.78	+2.0
2,164,638	-		PS417_10085	0.82	+0.6
2,164,640	+		PS417_10085	0.82	-1.6
2,164,641	-		PS417_10085	0.82	-0.2
2,164,777	+				+0.1
2,164,777	+				+1.1
2,164,777	+				+0.6
2,164,777	+				+0.3
2,164,777	+				+0.6
2,164,777	+				+0.2
2,164,778	-				-0.2
2,164,833	+				+0.0
2,164,833	+				-0.7
2,164,835	+				-0.1
2,164,836	-				+0.9
2,164,966	+				-1.5
2,165,034	-		PS417_10090	0.36	-0.5
2,165,041	+		PS417_10090	0.38	-0.1
2,165,042	-		PS417_10090	0.38	+0.2
2,165,042	-		PS417_10090	0.38	+0.2
2,165,109	+		PS417_10090	0.51	-0.2
2,165,109	+		PS417_10090	0.51	+0.4
2,165,110	-		PS417_10090	0.51	+0.5
2,165,212	+		PS417_10090	0.70	-0.6
2,165,223	+		PS417_10090	0.72	+1.2
2,165,223	+		PS417_10090	0.72	+0.7
2,165,223	+		PS417_10090	0.72	+3.5
2,165,223	+		PS417_10090	0.72	-1.4
2,165,224	-		PS417_10090	0.73	+1.2
2,165,224	-		PS417_10090	0.73	-0.2
2,165,224	-		PS417_10090	0.73	-0.9
2,165,224	-		PS417_10090	0.73	-0.9
2,165,297	+		PS417_10090	0.86	-0.7
2,165,297	+		PS417_10090	0.86	+0.0
2,165,297	+		PS417_10090	0.86	-0.2
2,165,297	+		PS417_10090	0.86	+0.4
2,165,298	-				-1.6
2,165,298	-		PS417_10090	0.87	-0.8
2,165,298	-		PS417_10090	0.87	-2.8
2,165,299	+		PS417_10090	0.87	-0.4
2,165,299	+		PS417_10090	0.87	-1.4
2,165,300	-		PS417_10090	0.87	+0.3
2,165,328	+				+0.7
2,165,346	+				+0.0
2,165,347	-				+0.0
2,165,357	-				+0.3
2,165,412	+				-2.0
2,165,412	+				+0.3
2,165,485	+				+0.7
2,165,485	+				+0.9
2,165,486	-				-0.0
2,165,603	+		PS417_10095	0.13	+0.4
2,165,603	+		PS417_10095	0.13	+2.7