Strain Fitness in Pseudomonas simiae WCS417 around PS417_09505

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,056,736	+		PS417_09495	0.82	+0.2
2,056,736	+		PS417_09495	0.82	-1.4
2,056,836	+				+0.3
2,056,837	-				-0.1
2,056,860	+				+0.4
2,056,860	+				+0.1
2,056,949	-				+1.2
2,056,954	+		PS417_09500	0.10	+0.6
2,056,954	+		PS417_09500	0.10	-0.3
2,056,955	-		PS417_09500	0.11	+0.2
2,056,955	-		PS417_09500	0.11	-0.2
2,057,294	-		PS417_09500	0.57	-2.4
2,057,417	+		PS417_09500	0.74	-0.2
2,057,418	-		PS417_09500	0.74	-0.7
2,057,418	-		PS417_09500	0.74	+0.1
2,057,465	+		PS417_09500	0.80	-1.7
2,057,466	-		PS417_09500	0.80	+1.1
2,057,472	+		PS417_09500	0.81	-0.6
2,057,521	+		PS417_09500	0.88	-0.2
2,057,522	-		PS417_09500	0.88	-0.2
2,057,645	+				+0.5
2,057,722	+				+0.3
2,057,723	-				+0.9
2,057,726	+				-0.8
2,057,726	+				-0.7
2,057,727	-				-0.7
2,057,755	+		PS417_09505	0.12	-0.3
2,057,867	-		PS417_09505	0.52	-0.4
2,057,906	+		PS417_09505	0.66	-0.7
2,057,979	+				+2.0
2,057,980	-				-0.3
2,057,980	-				-0.7
2,057,986	-				-3.1
2,058,013	-				+1.1
2,058,016	-				+1.1
2,058,033	-				+0.3
2,058,033	-				+0.4
2,058,115	+				-0.5
2,058,127	-				+2.1
2,058,381	+		PS417_09510	0.24	+0.2
2,058,383	+		PS417_09510	0.24	-0.5
2,058,503	-		PS417_09510	0.38	-0.9
2,058,554	+		PS417_09510	0.44	-1.0
2,058,563	+		PS417_09510	0.45	+0.5
2,058,563	+		PS417_09510	0.45	+0.2
2,058,564	-		PS417_09510	0.45	-0.0
2,058,564	-		PS417_09510	0.45	+1.5
2,058,596	+		PS417_09510	0.48	-1.1
2,058,597	-		PS417_09510	0.49	-3.2
2,058,597	-		PS417_09510	0.49	-0.4
2,058,597	-		PS417_09510	0.49	+0.0
2,058,597	-		PS417_09510	0.49	-0.1
2,058,610	+		PS417_09510	0.50	+0.9
2,058,710	+		PS417_09510	0.61	-0.1
2,058,710	+		PS417_09510	0.61	+0.1
2,058,710	+		PS417_09510	0.61	-1.3
2,058,710	+		PS417_09510	0.61	+1.7
2,058,710	+		PS417_09510	0.61	-0.9
2,058,710	+		PS417_09510	0.61	+1.3
2,058,711	-		PS417_09510	0.61	-0.5
2,058,711	-		PS417_09510	0.61	-0.8
2,058,711	-		PS417_09510	0.61	+0.8
2,058,711	-		PS417_09510	0.61	-0.2
2,058,711	-		PS417_09510	0.61	+0.0
2,058,714	+				-0.3
2,058,767	-		PS417_09510	0.68	+0.2
2,058,783	+		PS417_09510	0.69	-0.1
2,058,783	+				+1.7
2,058,783	+		PS417_09510	0.69	-0.1
2,058,783	+		PS417_09510	0.69	+2.0
2,058,783	+		PS417_09510	0.69	-0.3
2,058,784	-		PS417_09510	0.70	+0.3
2,058,784	-		PS417_09510	0.70	+0.7
2,058,784	-		PS417_09510	0.70	+0.3
2,058,784	-		PS417_09510	0.70	+0.8
2,058,784	-		PS417_09510	0.70	-0.3
2,058,784	-		PS417_09510	0.70	-0.2
2,058,785	+		PS417_09510	0.70	+2.5
2,058,785	+		PS417_09510	0.70	+1.7
2,058,785	+		PS417_09510	0.70	+0.3
2,058,785	+		PS417_09510	0.70	-0.6
2,058,785	+		PS417_09510	0.70	-0.3
2,058,785	+		PS417_09510	0.70	-0.7
2,058,785	+		PS417_09510	0.70	-0.9
2,058,785	+		PS417_09510	0.70	-0.7
2,058,785	+		PS417_09510	0.70	+1.0
2,058,785	+		PS417_09510	0.70	-0.1
2,058,786	-		PS417_09510	0.70	+1.2
2,058,786	-		PS417_09510	0.70	-0.3
2,058,786	-		PS417_09510	0.70	+0.0
2,058,786	-				+0.3
2,058,821	+		PS417_09510	0.74	-0.4
2,058,822	-		PS417_09510	0.74	-0.9
2,058,822	-				+0.9
2,058,877	+		PS417_09510	0.80	-0.1
2,058,877	+		PS417_09510	0.80	-1.0
2,058,878	-		PS417_09510	0.80	-0.6
2,058,943	-		PS417_09510	0.88	-0.2