Strain Fitness in Pseudomonas simiae WCS417 around PS417_09440

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,044,530	-				-1.6
2,044,573	-				+0.6
2,044,618	+				-0.1
2,044,618	+				-0.4
2,044,701	-				+0.2
2,044,701	-				+1.7
2,044,843	+		PS417_09435	0.45	+0.5
2,044,844	-		PS417_09435	0.45	-0.7
2,044,844	-		PS417_09435	0.45	-0.2
2,045,011	+		PS417_09435	0.81	-0.2
2,045,050	+		PS417_09435	0.90	+0.2
2,045,051	-				-0.8
2,045,133	+				-1.0
2,045,134	-				-0.3
2,045,134	-				-0.8
2,045,134	-				+0.0
2,045,134	-				+0.8
2,045,138	-				+0.6
2,045,138	-				-0.0
2,045,138	-				+0.5
2,045,140	-				+1.6
2,045,330	+				+1.3
2,045,456	+		PS417_09440	0.25	-0.2
2,045,722	+		PS417_09440	0.84	-1.7
2,045,876	+				-0.2
2,045,904	+				+0.4
2,045,905	-				+0.3
2,045,905	-				+1.0
2,046,077	+		PS417_09445	0.49	+0.5
2,046,078	-		PS417_09445	0.49	-1.2
2,046,260	+				+1.0
2,046,569	+		PS417_09450	0.29	-0.2
2,046,570	-		PS417_09450	0.29	-0.4
2,046,660	+		PS417_09450	0.37	-2.5
2,046,660	+		PS417_09450	0.37	+0.2
2,046,661	-		PS417_09450	0.37	-0.6
2,046,661	-		PS417_09450	0.37	+0.7
2,046,661	-		PS417_09450	0.37	-0.6
2,046,726	+		PS417_09450	0.43	-0.2