Strain Fitness in Pseudomonas simiae WCS417 around PS417_09130

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,982,865	+		PS417_09125	0.52	+0.2
1,982,866	-		PS417_09125	0.52	+0.3
1,983,192	+		PS417_09125	0.72	-1.4
1,983,193	-		PS417_09125	0.72	-0.6
1,983,193	-		PS417_09125	0.72	-1.2
1,983,193	-		PS417_09125	0.72	-0.1
1,983,193	-		PS417_09125	0.72	-1.2
1,983,193	-		PS417_09125	0.72	-0.4
1,983,193	-		PS417_09125	0.72	+1.2
1,983,326	+		PS417_09125	0.80	-0.8
1,983,439	-		PS417_09125	0.87	+1.5
1,983,642	-				-1.1
1,983,642	-				-0.7
1,983,643	+				+0.9
1,983,643	+				-0.5
1,983,643	+				-1.1
1,983,643	+				+0.8
1,983,643	+				+0.4
1,983,644	-				+0.4
1,983,644	-				-0.2
1,983,644	-				-0.0
1,983,690	+				-0.6
1,983,813	-				-0.3
1,983,813	-				+0.2
1,983,813	-				-0.4
1,984,203	-		PS417_09130	0.29	-1.7
1,984,656	-		PS417_09130	0.55	-0.8
1,984,683	-		PS417_09130	0.56	+2.0
1,984,683	-		PS417_09130	0.56	+0.9
1,984,784	+		PS417_09130	0.62	+0.1
1,984,792	+		PS417_09130	0.62	+0.3
1,984,832	+		PS417_09130	0.65	+0.1
1,984,833	-		PS417_09130	0.65	+1.4
1,984,833	-		PS417_09130	0.65	-0.1
1,984,972	+		PS417_09130	0.73	-0.5
1,985,014	-		PS417_09130	0.75	-1.1
1,985,073	-		PS417_09130	0.79	-0.8
1,985,073	-		PS417_09130	0.79	-0.4
1,985,094	+		PS417_09130	0.80	+0.7
1,985,162	+		PS417_09130	0.84	+0.6
1,985,163	-		PS417_09130	0.84	+0.2
1,985,163	-		PS417_09130	0.84	-0.3
1,985,163	-		PS417_09130	0.84	+1.0
1,985,215	-		PS417_09130	0.87	+2.6
1,985,384	-				+0.5
1,985,518	+				+0.8
1,985,518	+				+0.3
1,985,524	+				+0.2
1,985,525	-				+0.4
1,985,594	+				-0.2
1,985,696	-		PS417_09135	0.13	-1.1
1,985,858	-		PS417_09135	0.26	+2.3
1,985,959	+		PS417_09135	0.34	+0.3
1,985,983	+		PS417_09135	0.36	-0.6
1,986,112	+		PS417_09135	0.47	+1.4
1,986,112	+		PS417_09135	0.47	+2.3
1,986,113	-		PS417_09135	0.47	-0.5
1,986,225	+		PS417_09135	0.56	+0.1
1,986,226	-		PS417_09135	0.56	-0.7
1,986,335	-		PS417_09135	0.65	+0.1
1,986,335	-		PS417_09135	0.65	+0.5
1,986,370	+		PS417_09135	0.68	-0.8