Strain Fitness in Pseudomonas simiae WCS417 around PS417_08010

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,752,315	+				-0.2
1,752,316	-				+1.7
1,752,613	+		PS417_08010	0.30	+0.7
1,752,694	+		PS417_08010	0.36	-0.6
1,752,729	+		PS417_08010	0.39	-1.3
1,752,730	-		PS417_08010	0.39	+0.0
1,752,730	-		PS417_08010	0.39	+0.6
1,752,799	+		PS417_08010	0.45	+0.3
1,752,874	+		PS417_08010	0.51	-1.3
1,752,874	+		PS417_08010	0.51	-0.4
1,752,874	+		PS417_08010	0.51	+0.6
1,752,874	+		PS417_08010	0.51	+0.4
1,752,874	+		PS417_08010	0.51	-0.6
1,752,875	-		PS417_08010	0.51	-1.2
1,752,875	-		PS417_08010	0.51	-2.1
1,752,875	-		PS417_08010	0.51	-0.3
1,752,875	-		PS417_08010	0.51	-0.3
1,752,878	+		PS417_08010	0.51	+0.0
1,752,878	+		PS417_08010	0.51	+0.3
1,752,878	+		PS417_08010	0.51	-1.1
1,752,878	+		PS417_08010	0.51	-1.4
1,752,878	+		PS417_08010	0.51	-0.9
1,752,878	+		PS417_08010	0.51	+2.2
1,752,878	+		PS417_08010	0.51	+0.2
1,752,878	+		PS417_08010	0.51	-1.3
1,752,879	-		PS417_08010	0.51	+0.2
1,752,879	-		PS417_08010	0.51	-0.1
1,752,879	-		PS417_08010	0.51	-0.3
1,752,916	+		PS417_08010	0.54	+1.7
1,752,916	+		PS417_08010	0.54	+1.9
1,752,916	+		PS417_08010	0.54	+0.7
1,752,916	+		PS417_08010	0.54	+0.1
1,752,916	+		PS417_08010	0.54	-0.5
1,752,916	+		PS417_08010	0.54	-0.7
1,752,916	+		PS417_08010	0.54	+2.3
1,752,916	+		PS417_08010	0.54	-1.5
1,752,917	-		PS417_08010	0.54	+0.4
1,752,917	-		PS417_08010	0.54	-1.4
1,752,917	-		PS417_08010	0.54	-0.3
1,752,917	-		PS417_08010	0.54	+1.1
1,752,917	-		PS417_08010	0.54	-0.5
1,752,917	-		PS417_08010	0.54	+0.8
1,752,917	-		PS417_08010	0.54	-0.5
1,753,233	+		PS417_08010	0.80	-0.6
1,753,234	-		PS417_08010	0.80	-0.6
1,753,258	-		PS417_08010	0.82	-0.0
1,753,267	-		PS417_08010	0.83	-0.5
1,753,267	-		PS417_08010	0.83	-1.9
1,753,267	-				-1.4
1,753,267	-		PS417_08010	0.83	+0.3
1,753,267	-		PS417_08010	0.83	-0.4
1,753,298	+		PS417_08010	0.85	+1.2
1,753,299	-		PS417_08010	0.85	+1.1
1,753,368	+				+1.1
1,753,426	-				+0.6
1,753,428	+				+0.3
1,753,428	+				+1.5
1,753,429	-				-2.8
1,753,429	-				+0.9
1,753,457	+				+0.3
1,753,457	+				+0.2
1,753,565	+				-0.1
1,753,599	-				+2.2
1,753,707	+				-0.3
1,753,708	-				-1.4
1,753,763	+				-0.3
1,753,763	+				+0.4
1,753,763	+				-0.7
1,753,764	-				+0.4
1,753,764	-				+0.0
1,753,764	-				-1.4
1,753,767	+				-0.2
1,753,768	-				+0.3
1,753,783	-				+1.2
1,753,783	-				+0.2
1,753,899	+		PS417_08015	0.19	-2.4
1,753,899	+		PS417_08015	0.19	-1.9
1,753,900	-		PS417_08015	0.19	-2.2
1,754,008	+		PS417_08015	0.36	-0.1
1,754,011	+		PS417_08015	0.37	+0.4
1,754,012	-		PS417_08015	0.37	+0.9
1,754,089	-		PS417_08015	0.49	-0.2
1,754,134	+		PS417_08015	0.56	+2.4
1,754,134	+		PS417_08015	0.56	-0.9
1,754,225	-		PS417_08015	0.71	-0.8
1,754,247	-		PS417_08015	0.74	+0.1