Strain Fitness in Pseudomonas simiae WCS417 around PS417_00705

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
146,267	+		PS417_00695	0.79	+0.2
146,268	-		PS417_00695	0.80	+0.2
146,276	+		PS417_00695	0.80	-0.6
146,277	-		PS417_00695	0.80	-0.8
146,277	-		PS417_00695	0.80	-0.2
146,282	+		PS417_00695	0.80	+0.4
146,285	+		PS417_00695	0.81	-0.2
146,285	+		PS417_00695	0.81	-1.8
146,315	+		PS417_00695	0.82	-2.0
146,316	-		PS417_00695	0.82	-0.6
146,316	-		PS417_00695	0.82	-0.7
146,360	+		PS417_00695	0.85	+0.4
146,360	+		PS417_00695	0.85	-1.3
146,398	+		PS417_00695	0.88	+0.6
146,398	+		PS417_00695	0.88	+0.8
146,399	-		PS417_00695	0.88	+0.8
146,399	-		PS417_00695	0.88	+1.5
146,399	-		PS417_00695	0.88	-0.4
146,402	+		PS417_00695	0.88	+0.5
146,594	+				-0.2
146,647	+				-0.4
146,647	+				+0.5
146,647	+				+0.4
146,648	-				+1.2
146,648	-				+0.2
146,964	-				+1.3
146,976	-				-0.8
146,976	-				-0.1
147,053	+				+0.6
147,072	-				-0.9
147,148	+				-0.8
147,186	-		PS417_00705	0.18	-1.6
147,329	+		PS417_00705	0.53	-2.2
147,330	-		PS417_00705	0.53	-0.8
147,565	+				-0.3
147,566	-				+0.8
147,566	-				+0.7
147,604	+				-0.2
147,604	+				-0.2
147,605	-				-0.8
147,605	-				+0.3
147,658	+				-0.3
147,658	+				+1.2
147,658	+				-1.9
147,658	+				+0.3
147,659	-				+1.2
147,659	-				+3.0
147,659	-				+3.1
147,659	-				+0.9
147,659	-				-0.0
147,706	+				-1.4
147,707	-				-0.2
147,778	+		PS417_00710	0.12	-0.0
147,778	+		PS417_00710	0.12	-1.4
147,779	-		PS417_00710	0.12	-0.6
147,857	-		PS417_00710	0.16	+0.4
147,857	-		PS417_00710	0.16	-0.7
147,913	-		PS417_00710	0.19	+0.5
148,206	-		PS417_00710	0.33	-0.7
148,209	+		PS417_00710	0.33	-1.0
148,210	-		PS417_00710	0.33	-0.8
148,210	-		PS417_00710	0.33	-1.7
148,212	+		PS417_00710	0.33	-0.1
148,233	+		PS417_00710	0.34	+0.1
148,234	-		PS417_00710	0.34	+0.8
148,279	+		PS417_00710	0.37	-0.2
148,279	+		PS417_00710	0.37	+1.3
148,279	+		PS417_00710	0.37	-0.7
148,279	+		PS417_00710	0.37	+0.4
148,279	+		PS417_00710	0.37	+1.2
148,280	-		PS417_00710	0.37	-0.1
148,280	-		PS417_00710	0.37	-0.6
148,280	-		PS417_00710	0.37	-1.0