Strain Fitness in Pseudomonas simiae WCS417 around PS417_06920

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,531,014	+		PS417_06915	0.72	-1.1
1,531,084	-		PS417_06915	0.80	+0.8
1,531,097	+		PS417_06915	0.82	+0.5
1,531,101	+		PS417_06915	0.83	-0.2
1,531,101	+		PS417_06915	0.83	-0.4
1,531,102	-		PS417_06915	0.83	-0.7
1,531,102	-		PS417_06915	0.83	+0.3
1,531,124	-		PS417_06915	0.85	+0.4
1,531,128	-		PS417_06915	0.86	-0.1
1,531,201	+				+0.3
1,531,201	+				-0.5
1,531,202	-				+0.4
1,531,202	-				-1.0
1,531,281	-				+1.1
1,531,325	+				-0.3
1,531,344	-				+0.3
1,531,353	-				-0.4
1,531,470	+				-0.4
1,531,815	+				+0.3
1,531,819	+				-0.7
1,531,861	+				-2.1
1,531,906	-				+1.0
1,531,907	+				-1.0
1,531,907	+				-1.2
1,531,907	+				-3.0
1,531,908	-				-1.7
1,531,915	-				-0.8
1,531,973	-				+0.8
1,531,998	+				-0.2
1,532,001	+				-0.4
1,532,001	+				-1.1
1,532,002	-				+0.2
1,532,014	+				-0.7
1,532,014	+				-0.4
1,532,015	-				+0.9
1,532,015	-				+0.7
1,532,053	+				-2.0
1,532,129	+		PS417_06920	0.19	-1.1
1,532,130	-		PS417_06920	0.19	-2.4
1,532,254	-		PS417_06920	0.37	+0.5
1,532,268	+		PS417_06920	0.39	-0.4
1,532,268	+		PS417_06920	0.39	-0.4
1,532,268	+		PS417_06920	0.39	-0.1
1,532,327	+		PS417_06920	0.48	+2.2
1,532,328	-		PS417_06920	0.48	-0.2
1,532,331	+		PS417_06920	0.48	+4.4
1,532,332	-		PS417_06920	0.49	-0.4
1,532,332	-		PS417_06920	0.49	+1.4
1,532,440	-		PS417_06920	0.65	+0.1
1,532,499	+		PS417_06920	0.73	-1.4
1,532,499	+		PS417_06920	0.73	+3.3
1,532,499	+		PS417_06920	0.73	-0.3
1,532,511	+		PS417_06920	0.75	+0.0
1,532,512	-		PS417_06920	0.75	-0.8
1,532,753	-				+0.3
1,533,275	+		PS417_06925	0.66	+1.6
1,533,276	-		PS417_06925	0.66	-0.4
1,533,307	+		PS417_06925	0.69	+0.9
1,533,308	-		PS417_06925	0.69	-0.3
1,533,437	+		PS417_06925	0.83	+0.0
1,533,437	+		PS417_06925	0.83	+0.3
1,533,438	-		PS417_06925	0.84	+0.8