Strain Fitness in Pseudomonas simiae WCS417 around PS417_06835

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,510,826	+		PS417_06825	0.89	+2.0
1,510,857	-				+2.9
1,510,857	-				+0.7
1,510,857	-				+0.5
1,510,873	-				-2.2
1,510,924	+				-0.5
1,510,979	-				+0.4
1,510,989	+				+1.4
1,511,025	-				-0.6
1,511,043	+				-0.3
1,511,225	+		PS417_06830	0.13	+0.1
1,511,226	-		PS417_06830	0.13	-0.7
1,511,546	+		PS417_06830	0.68	-0.7
1,511,866	-		PS417_06835	0.11	-0.9
1,512,419	+		PS417_06835	0.59	-0.2
1,512,420	-		PS417_06835	0.59	-1.3
1,512,607	-		PS417_06835	0.75	-0.2
1,513,123	-				-2.3
1,513,128	-				-0.7
1,513,256	+				+0.8
1,513,257	-		PS417_06840	0.10	+2.5
1,513,257	-		PS417_06840	0.10	+2.7
1,513,257	-		PS417_06840	0.10	-0.2
1,513,382	+		PS417_06840	0.15	-0.2
1,513,433	+		PS417_06840	0.18	+0.5
1,513,433	+		PS417_06840	0.18	-1.0
1,513,433	+		PS417_06840	0.18	-2.0
1,513,445	+		PS417_06840	0.18	+0.6
1,513,496	+		PS417_06840	0.20	-0.6
1,513,497	-		PS417_06840	0.21	-0.5
1,513,497	-		PS417_06840	0.21	+0.1
1,513,500	-		PS417_06840	0.21	-0.2
1,513,500	-		PS417_06840	0.21	-2.1
1,513,559	+		PS417_06840	0.23	-0.0