Strain Fitness in Pseudomonas simiae WCS417 around PS417_06060

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,342,828	+				-0.3
1,343,073	+				+0.0
1,343,186	-		PS417_06055	0.27	-1.5
1,343,236	+		PS417_06055	0.41	+0.7
1,343,236	+		PS417_06055	0.41	-0.4
1,343,237	-		PS417_06055	0.41	-0.3
1,343,315	-		PS417_06055	0.64	+0.3
1,343,315	-		PS417_06055	0.64	-0.5
1,343,315	-		PS417_06055	0.64	-1.0
1,343,372	-		PS417_06055	0.81	-0.7
1,343,501	-				-1.0
1,343,514	+				+3.3
1,343,515	-				-0.6
1,343,546	+				+3.1
1,343,877	-				+0.3
1,343,877	-				+0.4
1,344,072	-		PS417_06060	0.17	+1.1
1,344,278	+		PS417_06060	0.25	-0.3
1,344,279	-		PS417_06060	0.25	+1.9
1,344,423	+		PS417_06060	0.30	+0.4
1,344,535	+		PS417_06060	0.35	+2.7
1,344,646	-		PS417_06060	0.39	-0.6
1,344,646	-		PS417_06060	0.39	+0.7
1,344,689	+		PS417_06060	0.41	-0.1
1,344,922	+		PS417_06060	0.49	-1.3
1,344,922	+		PS417_06060	0.49	-0.6
1,344,923	-		PS417_06060	0.49	+0.4
1,344,986	-		PS417_06060	0.52	-0.3
1,345,025	+		PS417_06060	0.53	+1.8
1,345,025	+		PS417_06060	0.53	+0.0
1,345,025	+		PS417_06060	0.53	-0.4
1,345,025	+		PS417_06060	0.53	-0.8
1,345,025	+		PS417_06060	0.53	+0.6
1,345,025	+		PS417_06060	0.53	+0.7
1,345,025	+		PS417_06060	0.53	+0.2
1,345,025	+		PS417_06060	0.53	-1.4
1,345,026	-		PS417_06060	0.53	+0.0
1,345,026	-		PS417_06060	0.53	-0.1
1,345,026	-		PS417_06060	0.53	+0.8
1,345,026	-		PS417_06060	0.53	+1.7
1,345,653	-		PS417_06060	0.77	+0.7
1,345,653	-		PS417_06060	0.77	+0.0
1,345,952	+		PS417_06060	0.89	-0.4
1,346,010	+				-1.7
1,346,011	-				+0.1
1,346,111	+				+0.4
1,346,111	+				+0.1
1,346,112	-				-0.3
1,346,112	-				+0.4
1,346,273	-				-0.3
1,346,352	+				-1.4
1,346,353	-				-2.4
1,346,356	+				-0.7
1,346,356	+				+0.5
1,346,356	+				-1.7
1,346,356	+				-0.0
1,346,356	+				+0.8
1,346,363	+				+0.6
1,346,363	+				+1.3
1,346,421	+				-1.0
1,346,523	+				-0.3
1,346,523	+				-0.6
1,347,210	+				-0.3
1,347,210	+				-0.5
1,347,247	+				+0.4
1,347,249	+				-1.6