Strain Fitness in Pseudomonas simiae WCS417 around PS417_05870

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,302,431	+		PS417_05860	0.43	-0.7
1,302,431	+		PS417_05860	0.43	-0.1
1,302,432	-		PS417_05860	0.43	-1.0
1,302,582	+		PS417_05860	0.65	+0.3
1,302,822	-				-1.1
1,302,822	-				-0.3
1,302,822	-				+1.0
1,302,822	-				+0.7
1,302,834	-				-0.6
1,303,175	+		PS417_05865	0.74	+0.4
1,303,175	+		PS417_05865	0.74	+0.0
1,303,259	+				-1.6
1,303,260	-				-1.1
1,303,276	+				+0.1
1,303,276	+				-0.3
1,303,277	-				-0.2
1,303,277	-				+2.7
1,303,310	-				-0.4
1,303,576	+		PS417_05870	0.31	+1.1
1,303,577	-				-0.3
1,303,577	-		PS417_05870	0.31	-0.0
1,303,642	+		PS417_05870	0.40	+0.4
1,303,642	+		PS417_05870	0.40	+0.9
1,303,642	+		PS417_05870	0.40	+1.7
1,303,642	+		PS417_05870	0.40	+0.9
1,303,642	+		PS417_05870	0.40	-1.9
1,303,643	-		PS417_05870	0.40	-0.0
1,303,848	+		PS417_05870	0.69	+0.1
1,304,055	+				-2.1
1,304,098	+				-0.4
1,304,098	+				-0.6
1,304,098	+				+1.4
1,304,098	+				+0.1
1,304,098	+				-2.9
1,304,098	+				-0.2
1,304,099	-				-0.0
1,304,103	+				+0.6
1,304,103	+				+0.1
1,304,104	-				-0.0
1,304,233	+				-1.7
1,304,233	+				-3.4
1,304,234	-				-0.3
1,304,307	+		PS417_05875	0.24	-0.9
1,304,308	-		PS417_05875	0.24	+0.3
1,304,308	-		PS417_05875	0.24	+1.0
1,304,362	+		PS417_05875	0.35	-0.3
1,304,363	-		PS417_05875	0.36	-0.9
1,304,363	-		PS417_05875	0.36	+0.2
1,304,363	-		PS417_05875	0.36	-0.9
1,304,546	+		PS417_05875	0.75	-1.3
1,304,556	+		PS417_05875	0.77	+0.5
1,304,556	+		PS417_05875	0.77	-1.7
1,304,556	+		PS417_05875	0.77	+1.6
1,304,556	+		PS417_05875	0.77	-0.8
1,304,557	-		PS417_05875	0.77	+2.0
1,304,749	+				+0.3
1,304,749	+				-0.2
1,304,792	-				-1.3