Strain Fitness in Pseudomonas simiae WCS417 around PS417_00575

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
114,170	+		PS417_00570	0.60	-0.2
114,211	+		PS417_00570	0.63	-0.4
114,476	-		PS417_00570	0.87	-0.5
114,519	+				-0.1
114,520	-				-0.9
114,780	+				-1.0
114,781	-				-0.2
114,804	+				+0.3
114,868	-				+0.8
114,916	-				+0.7
114,933	+				+0.5
114,933	+				-0.7
114,933	+				-0.8
114,934	-				+0.5
114,934	-				+2.6
114,934	-				-1.2
114,953	-				+0.8
114,968	+				+0.4
115,013	+				+0.0
115,013	+				+2.8
115,014	-				+0.3
115,014	-				-0.1
115,014	-				+0.5
115,060	-				-1.9
115,077	+				-0.8
115,077	+				-0.0
115,078	-				+0.2
115,081	+				+0.2
115,081	+				+0.8
115,081	+				-2.2
115,082	-				+1.1
115,082	-				-0.6
115,085	-				+2.4
115,173	+		PS417_00575	0.11	-0.3
115,173	+		PS417_00575	0.11	+0.9
115,173	+		PS417_00575	0.11	+1.0
115,174	-		PS417_00575	0.11	+1.1
115,176	+		PS417_00575	0.11	-0.2
115,176	+		PS417_00575	0.11	+0.3
115,177	-		PS417_00575	0.11	-0.2
115,177	-		PS417_00575	0.11	+0.4
115,310	+		PS417_00575	0.26	-0.9
115,311	-		PS417_00575	0.26	+0.2
115,311	-		PS417_00575	0.26	+1.1
115,344	-		PS417_00575	0.30	+0.8
115,383	+		PS417_00575	0.34	+1.5
115,384	-		PS417_00575	0.34	+0.5
115,540	-		PS417_00575	0.52	+2.5
115,540	-		PS417_00575	0.52	+0.4
115,543	+		PS417_00575	0.52	-1.4
115,544	-		PS417_00575	0.52	+0.2
115,601	+		PS417_00575	0.58	+2.1
115,771	-		PS417_00575	0.77	+2.4
115,975	+				+3.4
115,976	-				+0.1
116,088	+				+0.5
116,128	+				-1.4
116,129	-				-0.9
116,370	+		PS417_00580	0.20	-0.3
116,503	-		PS417_00580	0.31	-1.1
116,616	+		PS417_00580	0.41	+0.1
116,950	-		PS417_00580	0.69	+0.0
116,950	-		PS417_00580	0.69	-0.7
116,950	-		PS417_00580	0.69	-0.9