Strain Fitness in Pseudomonas simiae WCS417 around PS417_05525

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,242,461	+		PS417_05520	0.57	-2.1
1,242,473	+		PS417_05520	0.58	+1.1
1,242,474	-		PS417_05520	0.58	-0.3
1,242,474	-		PS417_05520	0.58	+2.2
1,242,748	+		PS417_05520	0.74	-2.7
1,242,749	-		PS417_05520	0.74	-0.3
1,242,749	-		PS417_05520	0.74	-1.0
1,242,815	+		PS417_05520	0.77	+1.1
1,242,815	+		PS417_05520	0.77	+0.1
1,242,815	+		PS417_05520	0.77	+1.3
1,242,816	-		PS417_05520	0.77	-1.9
1,242,816	-		PS417_05520	0.77	-2.4
1,242,818	+		PS417_05520	0.78	+0.1
1,242,861	+		PS417_05520	0.80	-0.6
1,243,167	+				+2.0
1,243,167	+				+1.0
1,243,167	+				+1.5
1,243,212	+				-3.5
1,243,495	+		PS417_05525	0.21	-0.8
1,243,496	-		PS417_05525	0.21	-2.5
1,243,502	-		PS417_05525	0.21	-1.0
1,244,105	-		PS417_05525	0.64	-1.3
1,244,303	+		PS417_05525	0.79	-0.5
1,244,304	-		PS417_05525	0.79	-1.6
1,244,470	+				-1.5
1,244,470	+				-3.9
1,244,471	-				-0.6
1,244,475	-				+0.5
1,244,475	-				-1.2
1,244,745	+				-0.9
1,244,746	-		PS417_05530	0.32	-0.6
1,244,746	-		PS417_05530	0.32	+0.8
1,244,760	+		PS417_05530	0.37	-0.3
1,244,844	+		PS417_05530	0.61	-0.1
1,244,845	-		PS417_05530	0.62	+1.5
1,244,895	+		PS417_05530	0.76	-0.6
1,244,896	-		PS417_05530	0.77	-0.1
1,244,896	-		PS417_05530	0.77	+0.9
1,244,898	+		PS417_05530	0.77	-0.1
1,245,003	+				+0.0
1,245,393	-				-0.9
1,245,393	-		PS417_05535	0.31	-0.0
1,245,393	-		PS417_05535	0.31	-2.1
1,245,529	+		PS417_05535	0.41	+0.7