Strain Fitness in Pseudomonas simiae WCS417 around PS417_05235

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,159,444	+		PS417_05225	0.59	-0.9
1,159,444	+		PS417_05225	0.59	-0.5
1,159,564	+		PS417_05225	0.75	-0.2
1,159,565	-		PS417_05225	0.75	+1.4
1,159,565	-		PS417_05225	0.75	-0.4
1,159,565	-		PS417_05225	0.75	+0.4
1,159,861	+		PS417_05230	0.12	-0.9
1,159,861	+		PS417_05230	0.12	+0.2
1,159,879	+		PS417_05230	0.14	+0.1
1,160,035	-		PS417_05230	0.38	+0.1
1,160,044	+		PS417_05230	0.39	+0.2
1,160,044	+		PS417_05230	0.39	+0.2
1,160,044	+		PS417_05230	0.39	+0.5
1,160,044	+		PS417_05230	0.39	-0.8
1,160,167	+		PS417_05230	0.58	+0.8
1,160,395	+				+0.4
1,160,395	+				+0.1
1,160,441	+				-0.6
1,160,441	+				-0.3
1,160,606	+		PS417_05235	0.42	-0.1
1,160,607	-		PS417_05235	0.42	-0.2
1,161,019	+				-0.1
1,161,019	+				+0.6
1,161,020	-				-1.2
1,161,093	-				-0.4
1,161,410	+		PS417_05240	0.16	-1.6
1,161,410	+		PS417_05240	0.16	-0.5
1,161,410	+		PS417_05240	0.16	-0.4
1,161,411	-		PS417_05240	0.16	+0.1
1,161,417	-		PS417_05240	0.16	-0.2
1,161,487	-		PS417_05240	0.19	-2.2
1,161,712	+		PS417_05240	0.28	-2.4
1,161,732	-		PS417_05240	0.29	-0.0