Strain Fitness in Pseudomonas simiae WCS417 around PS417_04840

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,073,209	-		PS417_04835	0.19	+1.1
1,073,600	+		PS417_04835	0.53	-2.0
1,073,601	-		PS417_04835	0.53	+2.3
1,073,610	-		PS417_04835	0.54	+2.9
1,073,889	-		PS417_04835	0.78	+0.9
1,074,136	+				-1.9
1,074,170	+				+0.5
1,074,171	-				-0.3
1,074,349	+		PS417_04840	0.11	-0.0
1,074,350	-		PS417_04840	0.11	-1.8
1,074,383	-		PS417_04840	0.13	+0.2
1,074,383	-		PS417_04840	0.13	+3.9
1,074,385	+		PS417_04840	0.13	+1.7
1,074,502	+		PS417_04840	0.21	-0.8
1,074,739	+		PS417_04840	0.37	+1.5
1,074,739	+				-0.3
1,074,739	+		PS417_04840	0.37	-2.6
1,074,739	+		PS417_04840	0.37	+0.1
1,074,739	+		PS417_04840	0.37	+3.7
1,074,740	-		PS417_04840	0.37	-0.3
1,074,876	+		PS417_04840	0.46	-1.3
1,074,876	+				+3.3
1,074,877	-		PS417_04840	0.46	+1.3
1,074,877	-				-0.3
1,074,900	-		PS417_04840	0.48	+4.2
1,074,900	-				+0.9
1,075,080	+		PS417_04840	0.60	-0.0
1,075,351	+				+1.1
1,075,462	+		PS417_04840	0.85	+0.7
1,075,462	+		PS417_04840	0.85	+0.0
1,075,472	-		PS417_04840	0.86	-0.3
1,075,502	+		PS417_04840	0.88	+1.0
1,075,550	+				-2.2
1,075,577	+				-2.2
1,075,577	+				-1.0
1,075,578	-				-0.8
1,075,578	-				+0.1
1,075,650	+				-0.6
1,075,651	-				-2.6
1,075,651	-				+1.7
1,075,651	-				-0.9
1,075,659	+				-0.5
1,075,670	+				+0.1
1,075,670	+				-3.1
1,075,670	+				-1.2
1,075,723	+				+0.6
1,075,755	+				+0.5
1,075,766	-				-2.3
1,076,017	-		PS417_04845	0.20	-0.3
1,076,017	-		PS417_04845	0.20	-2.1
1,076,168	+		PS417_04845	0.31	+1.4
1,076,301	+		PS417_04845	0.42	-0.3
1,076,301	+		PS417_04845	0.42	+0.1
1,076,302	-		PS417_04845	0.42	+0.3
1,076,302	-		PS417_04845	0.42	+0.4
1,076,304	+		PS417_04845	0.42	+0.1
1,076,568	+		PS417_04845	0.62	+0.0
1,076,568	+		PS417_04845	0.62	+0.4
1,076,569	-		PS417_04845	0.62	-0.0