Strain Fitness in Pseudomonas simiae WCS417 around PS417_04805

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,063,194	+		PS417_04800	0.27	+0.0
1,063,387	+		PS417_04800	0.43	-1.2
1,063,388	-		PS417_04800	0.44	-0.9
1,063,846	-		PS417_04800	0.82	-0.2
1,064,031	+				+0.7
1,064,031	+				+0.5
1,064,031	+				-0.0
1,064,032	-				-0.4
1,064,082	-				+0.5
1,064,186	+				-0.3
1,064,448	-		PS417_04805	0.25	+0.1
1,064,448	-		PS417_04805	0.25	+1.7
1,064,448	-		PS417_04805	0.25	-1.1
1,064,451	+		PS417_04805	0.25	+0.4
1,064,618	+		PS417_04805	0.36	-0.7
1,064,619	-		PS417_04805	0.36	+1.2
1,064,619	-		PS417_04805	0.36	+0.7
1,064,720	+		PS417_04805	0.43	+0.0
1,064,721	-		PS417_04805	0.43	+2.7
1,064,721	-		PS417_04805	0.43	+0.2
1,064,721	-		PS417_04805	0.43	-1.9
1,064,721	-		PS417_04805	0.43	-1.1
1,064,721	-		PS417_04805	0.43	-0.5
1,064,721	-		PS417_04805	0.43	+1.1
1,064,726	+		PS417_04805	0.43	+0.3
1,064,727	-		PS417_04805	0.43	-0.1
1,064,795	+		PS417_04805	0.47	+0.7
1,064,795	+		PS417_04805	0.47	+0.3
1,064,796	-		PS417_04805	0.47	-0.2
1,064,883	-				+0.7
1,064,883	-		PS417_04805	0.53	-0.3
1,064,897	+		PS417_04805	0.54	+0.2
1,064,897	+				-0.3
1,065,169	-		PS417_04805	0.72	+0.4
1,065,179	+		PS417_04805	0.72	+0.4
1,065,180	-		PS417_04805	0.73	+1.7
1,065,194	+		PS417_04805	0.73	+0.3
1,065,195	-		PS417_04805	0.74	+0.3
1,065,195	-		PS417_04805	0.74	-0.1
1,065,215	+		PS417_04805	0.75	+0.6
1,065,482	+				-0.2
1,065,491	+				+1.8
1,065,491	+				-0.9
1,065,492	-				+0.0
1,065,492	-				-0.5
1,065,540	-				+0.2
1,065,540	-				-2.5
1,065,542	+				-0.5
1,065,678	+				+0.4
1,065,678	+				+0.5
1,065,679	-				+0.3
1,065,743	+				+0.7
1,065,973	+		PS417_04810	0.14	+0.2
1,066,474	+		PS417_04810	0.59	+2.7
1,066,475	-		PS417_04810	0.59	+0.3
1,066,569	-		PS417_04810	0.68	+0.3