Strain Fitness in Pseudomonas simiae WCS417 around PS417_28025

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,047,502	+				+1.1
6,047,503	-				-1.2
6,047,505	+				-2.3
6,047,505	+				-0.7
6,047,505	+				-1.2
6,047,505	+				+0.7
6,047,505	+				-0.2
6,047,506	-				-1.1
6,047,506	-				-0.6
6,047,506	-				-1.1
6,047,506	-				-1.0
6,047,509	+				+0.6
6,047,509	+				-1.1
6,047,509	+				-0.3
6,047,510	-				-1.3
6,047,656	+		PS417_28015	0.77	-0.3
6,047,656	+		PS417_28015	0.77	+0.2
6,047,657	-		PS417_28015	0.78	-2.0
6,047,657	-		PS417_28015	0.78	-1.4
6,047,657	-		PS417_28015	0.78	+1.1
6,047,673	+		PS417_28015	0.88	+0.2
6,047,673	+		PS417_28015	0.88	+0.2
6,047,694	+				-0.3
6,047,694	+				-0.8
6,047,695	-				+0.0
6,047,699	-				-1.6
6,047,851	+				-0.5
6,047,852	-				+2.3
6,048,136	+		PS417_28020	0.44	-0.9
6,048,136	+		PS417_28020	0.44	+1.2
6,048,136	+				+0.7
6,048,137	-		PS417_28020	0.44	+0.5
6,048,216	+		PS417_28020	0.58	+3.2
6,048,216	+		PS417_28020	0.58	+0.3
6,048,456	+				-0.5
6,049,529	-		PS417_28030	0.20	+1.9
6,049,534	+		PS417_28030	0.21	-0.8
6,049,534	+		PS417_28030	0.21	+0.3
6,049,535	-		PS417_28030	0.21	+1.0
6,049,535	-		PS417_28030	0.21	-0.0
6,049,535	-		PS417_28030	0.21	-1.3
6,049,552	+		PS417_28030	0.26	+2.5
6,049,611	-		PS417_28030	0.41	-0.2
6,049,825	+				+1.5
6,049,825	+				+2.0
6,049,825	+				+2.2
6,049,825	+				+1.4
6,049,825	+				+0.2
6,049,826	-				+0.7
6,049,826	-				-1.1
6,049,826	-				+1.2
6,049,877	-				-0.1
6,049,893	-				-0.5
6,049,933	-				+1.0
6,049,945	+				+1.8
6,049,946	-				+0.4
6,050,069	+		PS417_28035	0.12	+0.4
6,050,294	+		PS417_28035	0.44	+1.1
6,050,294	+		PS417_28035	0.44	-0.2
6,050,295	-		PS417_28035	0.44	+0.2
6,050,295	-		PS417_28035	0.44	+0.8