Strain Fitness in Pseudomonas simiae WCS417 around PS417_28020

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,047,092	-		PS417_28010	0.65	+0.2
6,047,367	+		PS417_28010	0.89	-0.7
6,047,445	+				-0.1
6,047,502	+				+1.1
6,047,503	-				-1.2
6,047,505	+				-2.3
6,047,505	+				-0.7
6,047,505	+				-1.2
6,047,505	+				+0.7
6,047,505	+				-0.2
6,047,506	-				-1.1
6,047,506	-				-0.6
6,047,506	-				-1.1
6,047,506	-				-1.0
6,047,509	+				+0.6
6,047,509	+				-1.1
6,047,509	+				-0.3
6,047,510	-				-1.3
6,047,656	+		PS417_28015	0.77	-0.3
6,047,656	+		PS417_28015	0.77	+0.2
6,047,657	-		PS417_28015	0.78	-2.0
6,047,657	-		PS417_28015	0.78	-1.4
6,047,657	-		PS417_28015	0.78	+1.1
6,047,673	+		PS417_28015	0.88	+0.2
6,047,673	+		PS417_28015	0.88	+0.2
6,047,694	+				-0.3
6,047,694	+				-0.8
6,047,695	-				+0.0
6,047,699	-				-1.6
6,047,851	+				-0.5
6,047,852	-				+2.3
6,048,136	+		PS417_28020	0.44	-0.9
6,048,136	+		PS417_28020	0.44	+1.2
6,048,136	+				+0.7
6,048,137	-		PS417_28020	0.44	+0.5
6,048,216	+		PS417_28020	0.58	+3.2
6,048,216	+		PS417_28020	0.58	+0.3
6,048,456	+				-0.5