Strain Fitness in Pseudomonas simiae WCS417 around PS417_27520

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,936,521	+		PS417_27515	0.25	+0.3
5,936,521	+		PS417_27515	0.25	-0.2
5,936,522	-		PS417_27515	0.26	+0.7
5,936,620	+		PS417_27515	0.33	-0.8
5,936,621	-		PS417_27515	0.33	-1.7
5,936,792	+		PS417_27515	0.47	-0.6
5,937,079	+		PS417_27515	0.70	-1.6
5,937,082	+		PS417_27515	0.71	-0.6
5,937,297	+		PS417_27515	0.88	-1.0
5,937,349	+				+3.5
5,937,353	+				-1.3
5,937,353	+				+2.5
5,937,353	+				-0.6
5,937,353	+				-2.9
5,937,354	-				-0.8
5,937,354	-				-1.1
5,937,354	-				-1.1
5,937,433	+				+0.7
5,937,433	+				-0.4
5,937,434	-				+1.5
5,937,434	-				-0.3
5,937,519	+				-0.2
5,937,519	+				+1.4
5,937,519	+				+0.5
5,937,520	-				+0.3
5,937,681	+		PS417_27520	0.21	-1.6
5,937,906	+		PS417_27520	0.41	-0.3
5,937,966	+		PS417_27520	0.46	-0.2
5,937,966	+		PS417_27520	0.46	+1.3
5,937,968	+		PS417_27520	0.46	-1.2
5,937,969	-		PS417_27520	0.46	-2.3
5,938,183	+		PS417_27520	0.66	-3.5
5,938,543	+				+0.9
5,938,566	+				-0.0
5,938,567	-				-1.8