Strain Fitness in Pseudomonas simiae WCS417 around PS417_26930

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,814,317	-		PS417_26920	0.46	+1.4
5,814,329	+		PS417_26920	0.48	-0.0
5,814,330	-		PS417_26920	0.48	-0.4
5,814,330	-		PS417_26920	0.48	+0.1
5,814,390	-		PS417_26920	0.59	+0.6
5,814,453	+		PS417_26920	0.71	+1.7
5,814,454	-		PS417_26920	0.71	+1.3
5,814,454	-		PS417_26920	0.71	+1.0
5,814,535	+		PS417_26920	0.86	-2.0
5,814,569	+				-0.2
5,814,601	+				+0.7
5,814,622	+				-0.7
5,814,644	-				+0.1
5,814,690	+				-0.3
5,814,691	-				-0.3
5,814,691	-				+1.0
5,814,870	-		PS417_26925	0.31	-1.1
5,814,908	+		PS417_26925	0.37	+1.1
5,814,908	+		PS417_26925	0.37	+0.8
5,814,908	+		PS417_26925	0.37	+0.8
5,814,909	-		PS417_26925	0.38	-0.6
5,814,909	-		PS417_26925	0.38	-0.3
5,815,074	+		PS417_26925	0.67	+0.5
5,815,074	+		PS417_26925	0.67	-0.0
5,815,075	-		PS417_26925	0.68	-0.5
5,815,075	-		PS417_26925	0.68	-0.3
5,815,075	-		PS417_26925	0.68	-0.5
5,815,191	-		PS417_26925	0.88	+0.2
5,815,214	+				-3.2
5,815,214	+				+1.7
5,815,215	-				+1.9
5,815,215	-				+0.2
5,815,215	-				-1.0
5,815,280	+				-0.3
5,815,281	-				-0.1
5,815,281	-				+1.7
5,815,397	-		PS417_26930	0.13	-1.4
5,815,511	-		PS417_26930	0.23	-0.8
5,815,528	-		PS417_26930	0.24	-2.8
5,815,885	+		PS417_26930	0.56	-0.1
5,815,885	+		PS417_26930	0.56	-1.1
5,815,885	+		PS417_26930	0.56	-0.2
5,815,885	+		PS417_26930	0.56	+0.3
5,815,886	-		PS417_26930	0.56	+0.9
5,815,915	+		PS417_26930	0.58	-0.1
5,816,008	+		PS417_26930	0.66	-0.7
5,816,050	+		PS417_26930	0.70	+0.2
5,816,126	-		PS417_26930	0.77	-2.2
5,816,360	+				+1.1
5,816,367	+				+0.2
5,816,368	-				-1.7
5,816,368	-				+0.0
5,816,368	-				+0.5
5,816,431	-				-3.6
5,816,617	+		PS417_26935	0.17	+0.2
5,816,618	-		PS417_26935	0.17	-0.6
5,816,890	+		PS417_26935	0.44	-0.3
5,816,890	+		PS417_26935	0.44	-0.1
5,816,891	-		PS417_26935	0.44	+0.1
5,816,891	-		PS417_26935	0.44	-1.1
5,816,891	-		PS417_26935	0.44	+0.9
5,817,163	+		PS417_26935	0.71	-1.3
5,817,163	+		PS417_26935	0.71	-1.2
5,817,373	+				+0.6
5,817,374	-				-1.4