Strain Fitness in Pseudomonas simiae WCS417 around PS417_25670

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,543,796	+		PS417_25660	0.87	-0.8
5,543,933	-				-1.4
5,543,973	+				+0.0
5,543,973	+				-0.8
5,544,012	+				-0.7
5,544,013	-				+0.3
5,544,031	-				+2.3
5,544,033	+				+0.7
5,544,033	+				+0.1
5,544,033	+				-0.4
5,544,033	+				-3.4
5,544,034	-				-1.0
5,544,034	-				+0.2
5,544,034	-				-1.3
5,544,034	-				-0.8
5,544,034	-				+1.0
5,544,064	+				-0.9
5,544,496	-				-0.4
5,544,496	-				+0.2
5,544,505	+				+0.9
5,544,825	-		PS417_25670	0.31	-0.4
5,544,853	+		PS417_25670	0.34	-0.9
5,544,854	-		PS417_25670	0.34	-0.5
5,544,862	+		PS417_25670	0.35	-1.7
5,545,111	-		PS417_25670	0.61	-2.4
5,545,161	+		PS417_25670	0.66	+0.8
5,545,357	+		PS417_25670	0.87	-0.8
5,545,358	-		PS417_25670	0.87	-1.1
5,545,426	+				+2.0
5,545,426	+				-0.2
5,545,426	+				-1.0
5,545,426	+				-0.9
5,545,522	+				+0.5
5,545,522	+				+0.5
5,545,736	-		PS417_25675	0.19	+0.5
5,545,904	-		PS417_25675	0.36	-1.5
5,546,069	+		PS417_25675	0.54	-0.4
5,546,115	-		PS417_25675	0.59	+0.7
5,546,164	+		PS417_25675	0.64	+0.1
5,546,248	+		PS417_25675	0.72	+0.7
5,546,383	-		PS417_25675	0.87	+0.4
5,546,395	+		PS417_25675	0.88	+0.7
5,546,395	+		PS417_25675	0.88	-0.6
5,546,395	+		PS417_25675	0.88	+1.0