Strain Fitness in Pseudomonas simiae WCS417 around PS417_24125

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,224,248	+		PS417_24120	0.40	-0.6
5,224,249	-		PS417_24120	0.40	+0.1
5,224,267	+		PS417_24120	0.41	+0.7
5,224,268	-		PS417_24120	0.42	-0.9
5,224,295	+		PS417_24120	0.44	+0.3
5,224,401	+		PS417_24120	0.52	+1.9
5,224,478	-		PS417_24120	0.58	-2.3
5,224,478	-		PS417_24120	0.58	+0.6
5,224,478	-		PS417_24120	0.58	+0.4
5,224,478	-		PS417_24120	0.58	+0.5
5,224,540	+		PS417_24120	0.63	+0.2
5,224,540	+		PS417_24120	0.63	-0.5
5,224,541	-		PS417_24120	0.63	-0.7
5,224,541	-		PS417_24120	0.63	-0.2
5,224,625	-		PS417_24120	0.70	-0.2
5,224,625	-		PS417_24120	0.70	+0.1
5,224,626	+		PS417_24120	0.70	+1.4
5,224,626	+		PS417_24120	0.70	-0.5
5,224,626	+		PS417_24120	0.70	+0.6
5,224,626	+		PS417_24120	0.70	-1.1
5,224,626	+		PS417_24120	0.70	-2.5
5,224,626	+		PS417_24120	0.70	-2.2
5,224,627	-		PS417_24120	0.70	-1.3
5,224,627	-		PS417_24120	0.70	+0.2
5,224,655	+		PS417_24120	0.72	-1.4
5,224,656	-		PS417_24120	0.72	-0.7
5,224,656	-				+0.7
5,224,685	-		PS417_24120	0.75	-2.3
5,224,727	-		PS417_24120	0.78	-0.8
5,224,727	-		PS417_24120	0.78	-0.9
5,224,877	+				-0.0
5,224,877	+				+2.9
5,224,877	+				-2.0
5,224,878	-				-1.3
5,224,878	-				-0.1
5,224,894	+				-2.8
5,224,895	-				+0.7
5,224,895	-				-1.8
5,224,921	+				-0.0
5,224,922	-				+0.5
5,225,166	+				+1.5
5,225,216	+		PS417_24125	0.18	-0.3
5,225,224	-		PS417_24125	0.21	-1.2
5,225,227	-		PS417_24125	0.22	-2.0
5,225,227	-		PS417_24125	0.22	+1.7
5,225,227	-		PS417_24125	0.22	-0.5
5,225,227	-		PS417_24125	0.22	-2.2
5,225,229	+		PS417_24125	0.23	-0.9
5,225,453	+				+0.7
5,225,454	-				-1.0
5,225,465	-				-0.1
5,225,465	-				+2.1
5,225,465	-				+0.5
5,225,478	+				-0.1
5,225,478	+				+0.3
5,225,479	-				+0.2
5,225,589	-		PS417_24130	0.16	-1.9
5,225,589	-		PS417_24130	0.16	-1.8
5,225,589	-		PS417_24130	0.16	-0.7
5,225,694	-		PS417_24130	0.27	+0.0
5,225,713	+		PS417_24130	0.28	-0.1
5,225,713	+		PS417_24130	0.28	+1.9
5,225,713	+		PS417_24130	0.28	-0.1
5,225,713	+		PS417_24130	0.28	-0.1
5,225,714	-		PS417_24130	0.29	+0.4
5,226,083	+		PS417_24130	0.66	-0.1
5,226,084	-		PS417_24130	0.66	+0.5
5,226,084	-		PS417_24130	0.66	+1.7
5,226,150	+		PS417_24130	0.73	-0.0
5,226,356	+				-0.9
5,226,357	-				-0.3
5,226,357	-				+1.1
5,226,357	-				+0.7
5,226,357	-				+0.4
5,226,360	+				-0.2
5,226,360	+				+2.0
5,226,360	+				+0.1
5,226,360	+				+0.2
5,226,360	+				-0.4
5,226,360	+				+0.0
5,226,360	+				+0.2
5,226,360	+				+0.8
5,226,360	+				-1.0
5,226,360	+				+0.6
5,226,361	-				+0.5
5,226,361	-				+0.3
5,226,361	-				-0.7
5,226,361	-				+0.2
5,226,361	-				+0.2
5,226,361	-				-0.1
5,226,361	-				-0.2
5,226,361	-				-1.9