Strain Fitness in Pseudomonas simiae WCS417 around PS417_23435

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,075,728	+		PS417_23430	0.75	-1.5
5,075,728	+		PS417_23430	0.75	-0.3
5,075,729	-		PS417_23430	0.75	+0.3
5,075,845	+		PS417_23430	0.82	-0.5
5,075,845	+		PS417_23430	0.82	-0.3
5,075,851	+		PS417_23430	0.82	-0.9
5,075,868	+		PS417_23430	0.83	-2.5
5,075,868	+		PS417_23430	0.83	-3.1
5,075,868	+		PS417_23430	0.83	-0.0
5,075,869	-		PS417_23430	0.83	-1.0
5,075,869	-		PS417_23430	0.83	-0.4
5,075,869	-		PS417_23430	0.83	+0.8
5,076,222	-				-3.7
5,076,355	+				+0.4
5,076,356	-				+0.3
5,076,413	+				+0.1
5,076,497	-				+0.8
5,076,497	-				-1.3
5,076,500	+				-0.8
5,076,501	-				-0.7
5,076,524	-				-0.5
5,076,524	-				-0.4
5,076,524	-				-0.0
5,076,617	-				-2.8
5,076,679	+				-0.9
5,076,679	+				-0.9
5,076,910	+		PS417_23435	0.26	-2.1
5,076,910	+		PS417_23435	0.26	+0.2
5,076,910	+		PS417_23435	0.26	-1.8
5,076,910	+		PS417_23435	0.26	-1.7
5,077,114	+		PS417_23435	0.49	+1.9
5,077,115	-		PS417_23435	0.49	+0.4
5,077,115	-		PS417_23435	0.49	-1.2
5,077,115	-		PS417_23435	0.49	+0.1
5,077,115	-		PS417_23435	0.49	-0.6
5,077,115	-		PS417_23435	0.49	-0.5
5,077,115	-		PS417_23435	0.49	-1.5
5,077,154	-		PS417_23435	0.53	+0.1
5,077,199	-		PS417_23435	0.58	-2.1
5,077,812	+				+0.6
5,077,812	+				-0.3
5,077,813	-				+0.2
5,077,918	+		PS417_23440	0.18	-0.1
5,077,918	+		PS417_23440	0.18	+0.6
5,077,919	-		PS417_23440	0.18	-0.1
5,077,919	-		PS417_23440	0.18	-0.1
5,077,919	-		PS417_23440	0.18	-0.1
5,078,026	+		PS417_23440	0.30	+1.5
5,078,028	+		PS417_23440	0.30	-0.9
5,078,028	+		PS417_23440	0.30	-1.5
5,078,028	+		PS417_23440	0.30	-1.0
5,078,028	+		PS417_23440	0.30	+1.2
5,078,028	+		PS417_23440	0.30	+2.0
5,078,028	+		PS417_23440	0.30	+1.3
5,078,028	+		PS417_23440	0.30	-0.5
5,078,028	+		PS417_23440	0.30	-0.4
5,078,028	+		PS417_23440	0.30	-1.0
5,078,029	-		PS417_23440	0.30	-0.9
5,078,029	-		PS417_23440	0.30	+0.9
5,078,029	-		PS417_23440	0.30	+1.5
5,078,029	-		PS417_23440	0.30	+0.0
5,078,029	-		PS417_23440	0.30	+0.8
5,078,029	-		PS417_23440	0.30	-0.4
5,078,029	-		PS417_23440	0.30	-0.4
5,078,508	+		PS417_23440	0.83	+0.7
5,078,508	+		PS417_23440	0.83	-0.8