Strain Fitness in Pseudomonas simiae WCS417 around PS417_23430

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,073,402	-		PS417_23425	0.29	-0.7
5,073,429	-		PS417_23425	0.31	+0.9
5,073,429	-		PS417_23425	0.31	+0.4
5,073,446	+		PS417_23425	0.32	-0.6
5,073,446	+		PS417_23425	0.32	-0.4
5,073,446	+		PS417_23425	0.32	+0.4
5,073,446	+		PS417_23425	0.32	-2.8
5,073,447	-		PS417_23425	0.32	-1.1
5,073,447	-		PS417_23425	0.32	-0.7
5,073,447	-		PS417_23425	0.32	+2.2
5,073,447	-		PS417_23425	0.32	+0.0
5,073,479	+		PS417_23425	0.35	+0.2
5,073,480	-		PS417_23425	0.35	+0.1
5,073,602	+		PS417_23425	0.44	-1.3
5,073,603	-		PS417_23425	0.44	-1.4
5,073,791	+		PS417_23425	0.57	+0.4
5,073,909	-		PS417_23425	0.66	-0.2
5,073,909	-		PS417_23425	0.66	-0.5
5,073,909	-		PS417_23425	0.66	+1.5
5,073,911	+		PS417_23425	0.66	+0.0
5,073,911	+		PS417_23425	0.66	-0.8
5,073,992	+		PS417_23425	0.72	+0.7
5,074,032	-		PS417_23425	0.75	+0.2
5,074,044	+		PS417_23425	0.76	-1.0
5,074,045	-		PS417_23425	0.76	+2.7
5,074,045	-		PS417_23425	0.76	-0.5
5,074,046	+		PS417_23425	0.76	-0.2
5,074,046	+		PS417_23425	0.76	-1.9
5,074,046	+		PS417_23425	0.76	-0.2
5,074,046	+		PS417_23425	0.76	-1.0
5,074,047	-		PS417_23425	0.76	+0.1
5,074,047	-		PS417_23425	0.76	-0.2
5,074,047	-		PS417_23425	0.76	+1.1
5,074,047	-		PS417_23425	0.76	+1.2
5,074,047	-		PS417_23425	0.76	-0.2
5,074,047	-		PS417_23425	0.76	+0.3
5,074,047	-		PS417_23425	0.76	-0.7
5,074,103	+		PS417_23425	0.80	+1.7
5,074,103	+		PS417_23425	0.80	+0.5
5,074,104	-		PS417_23425	0.81	-0.3
5,074,104	-		PS417_23425	0.81	+0.3
5,074,104	-		PS417_23425	0.81	-0.3
5,074,362	+				+0.7
5,074,363	-				-3.0
5,074,386	+				+0.6
5,074,450	+				+1.7
5,074,450	+				-3.4
5,074,475	-				+0.5
5,074,475	-				+0.3
5,074,475	-				-1.6
5,074,492	+				+0.5
5,074,493	-				+0.2
5,074,493	-				+0.8
5,074,634	-		PS417_23430	0.13	-0.7
5,074,634	-		PS417_23430	0.13	-0.9
5,074,634	-		PS417_23430	0.13	+0.0
5,074,968	-		PS417_23430	0.32	+0.1
5,075,086	+		PS417_23430	0.39	-0.3
5,075,087	-		PS417_23430	0.39	+0.1
5,075,087	-		PS417_23430	0.39	-0.5
5,075,087	-		PS417_23430	0.39	+0.5
5,075,087	-		PS417_23430	0.39	-0.9
5,075,089	+		PS417_23430	0.39	-0.1
5,075,090	-		PS417_23430	0.39	-0.3
5,075,233	+		PS417_23430	0.47	-0.2
5,075,233	+		PS417_23430	0.47	-0.5
5,075,233	+		PS417_23430	0.47	-0.4
5,075,234	-		PS417_23430	0.47	-0.0
5,075,234	-		PS417_23430	0.47	+0.3
5,075,245	+		PS417_23430	0.48	+0.3
5,075,335	-		PS417_23430	0.53	-0.2
5,075,335	-				-0.9
5,075,335	-		PS417_23430	0.53	-0.4
5,075,425	+		PS417_23430	0.58	-0.4
5,075,426	-		PS417_23430	0.58	+1.0
5,075,426	-		PS417_23430	0.58	-0.9
5,075,426	-		PS417_23430	0.58	+1.5
5,075,663	+		PS417_23430	0.71	-0.0
5,075,664	-		PS417_23430	0.71	-3.0
5,075,664	-		PS417_23430	0.71	-0.5
5,075,664	-		PS417_23430	0.71	-0.8
5,075,728	+		PS417_23430	0.75	-1.5
5,075,728	+		PS417_23430	0.75	-0.3
5,075,729	-		PS417_23430	0.75	+0.3
5,075,845	+		PS417_23430	0.82	-0.5
5,075,845	+		PS417_23430	0.82	-0.3
5,075,851	+		PS417_23430	0.82	-0.9
5,075,868	+		PS417_23430	0.83	-2.5
5,075,868	+		PS417_23430	0.83	-3.1
5,075,868	+		PS417_23430	0.83	-0.0
5,075,869	-		PS417_23430	0.83	-1.0
5,075,869	-		PS417_23430	0.83	-0.4
5,075,869	-		PS417_23430	0.83	+0.8
5,076,222	-				-3.7
5,076,355	+				+0.4
5,076,356	-				+0.3
5,076,413	+				+0.1
5,076,497	-				+0.8
5,076,497	-				-1.3
5,076,500	+				-0.8
5,076,501	-				-0.7
5,076,524	-				-0.5
5,076,524	-				-0.4
5,076,524	-				-0.0
5,076,617	-				-2.8
5,076,679	+				-0.9
5,076,679	+				-0.9
5,076,910	+		PS417_23435	0.26	-2.1
5,076,910	+		PS417_23435	0.26	+0.2
5,076,910	+		PS417_23435	0.26	-1.8
5,076,910	+		PS417_23435	0.26	-1.7
5,077,114	+		PS417_23435	0.49	+1.9
5,077,115	-		PS417_23435	0.49	+0.4
5,077,115	-		PS417_23435	0.49	-1.2
5,077,115	-		PS417_23435	0.49	+0.1
5,077,115	-		PS417_23435	0.49	-0.6
5,077,115	-		PS417_23435	0.49	-0.5
5,077,115	-		PS417_23435	0.49	-1.5
5,077,154	-		PS417_23435	0.53	+0.1