Strain Fitness in Pseudomonas simiae WCS417 around PS417_21280

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,624,837	+		PS417_21275	0.57	-1.2
4,624,837	+		PS417_21275	0.57	-3.1
4,624,837	+		PS417_21275	0.57	-1.1
4,624,838	-		PS417_21275	0.57	+1.9
4,624,838	-		PS417_21275	0.57	-1.1
4,625,018	-		PS417_21275	0.70	-0.5
4,625,018	-		PS417_21275	0.70	-1.3
4,625,018	-		PS417_21275	0.70	+0.6
4,625,018	-		PS417_21275	0.70	-0.8
4,625,086	-		PS417_21275	0.75	-1.3
4,625,089	+		PS417_21275	0.75	-1.5
4,625,248	+		PS417_21275	0.86	-1.5
4,625,248	+		PS417_21275	0.86	-1.0
4,625,249	-		PS417_21275	0.86	-0.5
4,625,384	-				-0.4
4,625,384	-				+1.7
4,625,424	-				-1.7
4,625,424	-				-2.5
4,625,432	-				-0.8
4,625,510	-				+0.9
4,625,517	+				-0.6
4,625,599	+				-0.3
4,625,599	+				-0.6
4,625,600	-				+0.5
4,625,669	-				-0.1
4,625,670	+				-2.4
4,625,671	-				-0.7
4,625,709	+				+1.3
4,625,709	+				+0.1
4,625,710	-				-0.1
4,625,710	-				-0.8
4,625,833	+		PS417_21280	0.14	-0.6
4,625,834	-		PS417_21280	0.14	+0.1
4,625,880	+		PS417_21280	0.19	+1.3
4,625,881	-		PS417_21280	0.20	+2.2
4,625,881	-		PS417_21280	0.20	+0.2
4,625,943	-		PS417_21280	0.27	+0.5
4,626,272	-		PS417_21280	0.68	+0.1
4,626,286	+		PS417_21280	0.69	-0.0
4,626,292	+				+0.7
4,626,293	-		PS417_21280	0.70	-0.5
4,626,323	-		PS417_21280	0.74	+0.5
4,626,590	+		PS417_21285	0.16	-0.1
4,626,590	+		PS417_21285	0.16	+0.6
4,626,591	-		PS417_21285	0.16	+0.3
4,626,591	-		PS417_21285	0.16	+0.5
4,627,075	-		PS417_21290	0.21	-2.3
4,627,097	+		PS417_21290	0.24	+0.2
4,627,098	-		PS417_21290	0.24	-0.4
4,627,098	-		PS417_21290	0.24	-0.3
4,627,176	+		PS417_21290	0.33	-0.1
4,627,176	+		PS417_21290	0.33	+1.2
4,627,176	+		PS417_21290	0.33	-0.4
4,627,335	+		PS417_21290	0.53	-1.3
4,627,371	+		PS417_21290	0.57	-0.5
4,627,401	+		PS417_21290	0.61	+0.7
4,627,402	-		PS417_21290	0.61	-0.3
4,627,402	-		PS417_21290	0.61	+0.0
4,627,402	-		PS417_21290	0.61	+0.6