Strain Fitness in Pseudomonas simiae WCS417 around PS417_19910

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
4,322,536	+		PS417_19900	0.42	-1.7
4,322,623	+		PS417_19900	0.53	+1.3
4,322,666	-		PS417_19900	0.59	+0.5
4,322,735	-		PS417_19900	0.68	+0.5
4,322,773	+		PS417_19900	0.72	-2.6
4,322,774	-		PS417_19900	0.72	-0.7
4,322,774	-		PS417_19900	0.72	+1.3
4,322,774	-		PS417_19900	0.72	+0.1
4,322,774	-		PS417_19900	0.72	-0.2
4,322,996	+				-1.1
4,322,997	-				-0.2
4,322,997	-				-0.7
4,323,444	-				+0.1
4,323,553	+				+0.4
4,323,553	+				-0.1
4,323,554	-				-0.2
4,323,556	-				-0.2
4,323,640	+		PS417_19910	0.16	-1.4
4,323,641	-		PS417_19910	0.16	+0.3
4,323,641	-		PS417_19910	0.16	-1.0
4,323,853	-		PS417_19910	0.34	-2.4
4,324,195	+		PS417_19910	0.63	-0.0
4,324,256	+		PS417_19910	0.68	-0.2
4,324,256	+				-1.0
4,324,257	-		PS417_19910	0.68	-0.7
4,324,492	+		PS417_19910	0.88	-1.6
4,324,546	+				+0.2
4,324,547	-				-2.1
4,324,547	-				+0.0
4,324,547	-				+0.7
4,324,547	-				+1.4
4,324,547	-				-0.1
4,324,547	-				-0.1
4,324,547	-				-0.2
4,324,548	+				-0.5
4,324,548	+				-1.4
4,324,765	-				+1.3
4,324,836	+		PS417_19915	0.16	-1.1
4,324,837	-		PS417_19915	0.17	+0.4
4,324,984	-		PS417_19915	0.35	-0.5
4,325,001	+		PS417_19915	0.37	+0.9
4,325,002	-		PS417_19915	0.37	+0.5
4,325,007	+		PS417_19915	0.38	-1.7
4,325,064	+		PS417_19915	0.45	-0.5
4,325,250	+		PS417_19915	0.68	-0.3
4,325,250	+		PS417_19915	0.68	-1.8
4,325,250	+		PS417_19915	0.68	+0.1
4,325,250	+		PS417_19915	0.68	-0.1
4,325,250	+		PS417_19915	0.68	+0.2
4,325,250	+		PS417_19915	0.68	-1.6
4,325,251	-		PS417_19915	0.68	-0.8
4,325,251	-		PS417_19915	0.68	+0.4
4,325,322	+		PS417_19915	0.76	-0.0
4,325,322	+		PS417_19915	0.76	+0.5
4,325,322	+		PS417_19915	0.76	+0.1
4,325,322	+				+1.8
4,325,323	-		PS417_19915	0.77	-0.8
4,325,323	-		PS417_19915	0.77	-0.2
4,325,560	+				-1.6
4,325,561	-				-0.3
4,325,565	+				+0.2
4,325,565	+				-0.1
4,325,619	-				-1.5
4,325,619	-				-0.9