Strain Fitness in Pseudomonas simiae WCS417 around PS417_17210

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,757,468	+				+0.3
3,757,468	+				+0.8
3,757,468	+				+0.9
3,757,469	-				-3.6
3,757,469	-				-2.3
3,757,552	-		PS417_17205	0.14	-0.2
3,757,552	-		PS417_17205	0.14	-0.7
3,757,603	+		PS417_17205	0.19	+0.3
3,757,604	-		PS417_17205	0.19	-3.0
3,757,604	-		PS417_17205	0.19	-1.7
3,757,604	-		PS417_17205	0.19	-5.1
3,757,605	+		PS417_17205	0.19	+1.1
3,757,605	+		PS417_17205	0.19	+1.5
3,757,605	+		PS417_17205	0.19	+0.4
3,757,605	+		PS417_17205	0.19	+0.3
3,757,606	-		PS417_17205	0.20	+2.3
3,757,606	-		PS417_17205	0.20	-2.6
3,757,834	+		PS417_17205	0.45	+1.6
3,758,424	+				-0.5
3,758,511	-				-1.8
3,758,601	-		PS417_17210	0.13	-0.3
3,758,613	-		PS417_17210	0.14	+2.1
3,758,636	-		PS417_17210	0.16	-0.1
3,758,636	-		PS417_17210	0.16	-1.5
3,758,715	-		PS417_17210	0.22	-0.4
3,758,927	+		PS417_17210	0.40	+0.2
3,759,005	+		PS417_17210	0.46	-0.5
3,759,006	-		PS417_17210	0.46	-1.8
3,759,123	+		PS417_17210	0.56	-0.5
3,759,124	-		PS417_17210	0.56	+0.6
3,759,127	+		PS417_17210	0.56	-3.8
3,759,127	+		PS417_17210	0.56	-0.2
3,759,127	+		PS417_17210	0.56	-0.3
3,759,127	+		PS417_17210	0.56	-1.7
3,759,127	+		PS417_17210	0.56	-1.6
3,759,128	-		PS417_17210	0.56	-0.5
3,759,128	-		PS417_17210	0.56	-0.3
3,759,128	-		PS417_17210	0.56	+0.8
3,759,128	-		PS417_17210	0.56	-1.3
3,759,131	+		PS417_17210	0.57	-0.4
3,759,131	+		PS417_17210	0.57	-1.8
3,759,132	-		PS417_17210	0.57	+1.6
3,759,132	-		PS417_17210	0.57	-2.7
3,759,132	-		PS417_17210	0.57	-0.2
3,759,152	-		PS417_17210	0.58	+0.2
3,759,157	+		PS417_17210	0.59	+0.0
3,759,157	+		PS417_17210	0.59	-0.4
3,759,158	-		PS417_17210	0.59	-0.3
3,759,364	+		PS417_17210	0.76	+0.2
3,759,365	-		PS417_17210	0.76	+0.4
3,759,404	+		PS417_17210	0.79	+0.5
3,759,404	+		PS417_17210	0.79	-0.7
3,759,569	+				-0.5
3,759,569	+				-0.2
3,759,570	-				-0.5
3,759,570	-				-0.3
3,759,570	-				-0.4
3,759,657	+				+2.3
3,759,714	-				+0.2
3,759,833	+				-1.5
3,759,834	-				-0.0
3,759,834	-				+0.1
3,760,025	-				-0.2
3,760,025	-				-1.3
3,760,119	+				-0.5
3,760,119	+				-0.1
3,760,120	-				+0.2
3,760,120	-				-0.0
3,760,154	+				-0.9
3,760,165	+				-1.0