Strain Fitness in Pseudomonas simiae WCS417 around PS417_16960

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,699,087	-		PS417_16950	0.82	+0.4
3,699,190	-				-0.7
3,699,225	+				-1.0
3,699,225	+				-0.5
3,699,226	-				-0.8
3,699,238	+				+1.2
3,699,251	+				-0.6
3,699,251	+				-0.3
3,699,252	-				-0.2
3,699,409	+		PS417_16955	0.21	+0.1
3,699,409	+		PS417_16955	0.21	-0.9
3,699,409	+		PS417_16955	0.21	+0.2
3,699,410	-		PS417_16955	0.21	+0.6
3,699,525	+		PS417_16955	0.36	-1.1
3,699,762	+		PS417_16955	0.68	-0.3
3,699,763	-		PS417_16955	0.68	-0.9
3,699,884	+		PS417_16955	0.84	+0.4
3,699,885	-		PS417_16955	0.84	-0.0
3,699,887	+		PS417_16955	0.85	+0.6
3,699,922	-		PS417_16955	0.89	+0.2
3,700,037	-				+0.6
3,700,075	+				-1.5
3,700,075	+				-0.3
3,700,076	-				-0.1
3,700,076	-				-1.0
3,700,108	-				+1.6
3,700,179	+				-1.6
3,700,179	+				-0.3
3,700,180	-				+0.2
3,700,258	+				-1.3
3,700,273	+				-0.5
3,700,274	-				-0.3
3,700,274	-				-1.3
3,700,549	+		PS417_16960	0.19	+0.5
3,700,969	+		PS417_16960	0.35	+1.2
3,700,969	+		PS417_16960	0.35	+1.6
3,700,969	+				+2.4
3,700,970	-		PS417_16960	0.36	+0.7
3,700,970	-		PS417_16960	0.36	-0.4
3,700,978	+		PS417_16960	0.36	-0.5
3,700,978	+		PS417_16960	0.36	+1.9
3,700,978	+		PS417_16960	0.36	+2.0
3,700,979	-		PS417_16960	0.36	+0.5
3,701,023	+		PS417_16960	0.38	+1.2
3,701,024	-		PS417_16960	0.38	-0.2
3,701,143	+		PS417_16960	0.42	+0.8
3,701,221	+		PS417_16960	0.46	+0.3
3,701,399	-		PS417_16960	0.53	+0.8
3,701,448	+		PS417_16960	0.55	+1.3
3,701,448	+		PS417_16960	0.55	-2.1
3,701,448	+		PS417_16960	0.55	-0.9
3,701,449	-		PS417_16960	0.55	+1.4
3,701,449	-		PS417_16960	0.55	-1.5
3,701,449	-		PS417_16960	0.55	-1.5
3,701,449	-		PS417_16960	0.55	-0.7
3,701,596	+		PS417_16960	0.61	+0.3
3,701,597	-		PS417_16960	0.61	+0.9
3,701,686	+		PS417_16960	0.64	+0.5
3,701,686	+		PS417_16960	0.64	+0.5
3,701,687	-		PS417_16960	0.64	-0.2
3,701,888	-		PS417_16960	0.72	+1.2
3,701,890	+		PS417_16960	0.72	+1.0
3,701,891	-		PS417_16960	0.73	+0.1
3,701,984	-		PS417_16960	0.76	+1.5
3,702,181	-		PS417_16960	0.84	+0.0
3,702,302	-		PS417_16960	0.89	+0.2
3,702,625	-				+0.1
3,702,671	-				+1.8
3,702,715	+				+1.8
3,702,950	+				+1.4
3,702,950	+				+0.4
3,702,951	-				+0.7
3,702,951	-				-0.5
3,702,951	-				+0.4
3,702,951	-				+0.3
3,703,126	+		PS417_16965	0.13	-0.8
3,703,170	+		PS417_16965	0.14	+1.3
3,703,170	+		PS417_16965	0.14	-0.7