Strain Fitness in Pseudomonas simiae WCS417 around PS417_16825

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,668,500	-		PS417_16815	0.86	+0.3
3,668,633	+				-0.1
3,668,772	+				+0.2
3,668,971	+		PS417_16820	0.27	+1.5
3,669,801	+		PS417_16825	0.35	-0.6
3,669,802	-		PS417_16825	0.35	-2.6
3,669,802	-		PS417_16825	0.35	-1.4
3,669,802	-		PS417_16825	0.35	-1.9
3,669,802	-		PS417_16825	0.35	-0.5
3,669,838	+		PS417_16825	0.39	-0.2
3,670,505	+				+0.5
3,670,579	-				+0.1
3,670,605	+				-0.6
3,670,605	+				+0.1
3,670,613	+				-0.3
3,670,613	+				-1.7
3,670,625	-				+0.4
3,670,688	+				-0.1
3,670,733	+				-1.4
3,670,896	+				+0.2
3,670,906	-				-1.1
3,670,908	+		PS417_16830	0.10	+1.8
3,670,908	+		PS417_16830	0.10	-0.6
3,670,908	+		PS417_16830	0.10	+0.7
3,670,909	-		PS417_16830	0.10	-0.5
3,670,909	-		PS417_16830	0.10	+1.3
3,670,909	-		PS417_16830	0.10	-0.7
3,670,909	-		PS417_16830	0.10	+0.0
3,670,909	-		PS417_16830	0.10	-0.5
3,671,095	-		PS417_16830	0.16	+0.2
3,671,095	-		PS417_16830	0.16	-2.2
3,671,095	-		PS417_16830	0.16	-0.6
3,671,175	+		PS417_16830	0.19	+0.1
3,671,176	-		PS417_16830	0.19	+0.1
3,671,341	-		PS417_16830	0.25	-0.5