Strain Fitness in Pseudomonas simiae WCS417 around PS417_16175

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,545,222	+				-0.3
3,545,420	+		PS417_16165	0.66	-0.8
3,545,421	-		PS417_16165	0.66	-0.3
3,545,430	-				+0.3
3,545,432	+		PS417_16165	0.68	-1.2
3,545,433	-		PS417_16165	0.68	-0.0
3,545,487	-		PS417_16165	0.73	+0.2
3,545,548	-		PS417_16165	0.80	-3.7
3,545,577	+		PS417_16165	0.83	+0.0
3,545,688	+				+0.9
3,545,688	+				-1.7
3,545,753	-				-0.2
3,545,802	+		PS417_16170	0.10	+0.3
3,546,152	-				-0.2
3,546,152	-				+0.0
3,546,349	+		PS417_16175	0.28	+0.2
3,546,350	-		PS417_16175	0.29	-0.2
3,546,350	-		PS417_16175	0.29	-0.6
3,546,535	-		PS417_16175	0.53	-2.7
3,546,591	+		PS417_16175	0.60	-1.4
3,546,592	-		PS417_16175	0.61	-0.6
3,546,593	+				+2.1
3,546,640	-		PS417_16175	0.67	+0.1
3,546,663	-		PS417_16175	0.70	-1.1
3,546,977	-				-0.0
3,547,402	-		PS417_16180	0.24	-1.1
3,547,609	-		PS417_16180	0.42	+0.7
3,547,609	-		PS417_16180	0.42	-0.1
3,547,656	+		PS417_16180	0.46	+0.4