Strain Fitness in Pseudomonas simiae WCS417 around PS417_15420

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
3,379,007	+		PS417_15415	0.31	+3.4
3,379,008	-		PS417_15415	0.31	-0.3
3,379,412	+		PS417_15415	0.66	+0.7
3,379,593	-		PS417_15415	0.82	+0.4
3,379,607	+		PS417_15415	0.83	-1.0
3,379,608	-		PS417_15415	0.83	+0.9
3,379,608	-		PS417_15415	0.83	-0.1
3,379,608	-		PS417_15415	0.83	+0.1
3,379,626	-		PS417_15415	0.85	-2.1
3,379,667	+		PS417_15415	0.88	-0.4
3,379,668	-		PS417_15415	0.88	-1.6
3,379,794	-				-1.5
3,379,859	-				+0.3
3,379,910	+				+0.0
3,379,910	+				-1.0
3,379,911	-				+0.2
3,379,911	-				-0.8
3,379,911	-				-1.5
3,379,978	-		PS417_15420	0.15	-0.4
3,380,030	+		PS417_15420	0.23	+0.2
3,380,030	+				-0.3
3,380,031	-		PS417_15420	0.23	+1.4
3,380,031	-		PS417_15420	0.23	+0.6
3,380,267	+		PS417_15420	0.62	+0.6
3,380,267	+		PS417_15420	0.62	-0.6
3,380,268	-		PS417_15420	0.62	-0.0
3,380,276	+		PS417_15420	0.64	+0.6
3,380,277	-		PS417_15420	0.64	+1.6
3,380,300	+		PS417_15420	0.68	+0.1
3,380,300	+		PS417_15420	0.68	-0.6
3,380,300	+		PS417_15420	0.68	+0.6
3,380,301	-		PS417_15420	0.68	-0.6
3,380,301	-		PS417_15420	0.68	+0.2
3,380,301	-		PS417_15420	0.68	+0.3
3,380,301	-		PS417_15420	0.68	+0.2
3,380,462	+				-1.0
3,380,462	+				+0.9
3,380,462	+				-1.5
3,380,463	-				-0.5
3,380,510	+				-0.4
3,380,530	+				+0.7
3,380,631	+				+0.8
3,380,631	+				-0.9
3,380,632	-				-2.7
3,380,744	-				-0.0
3,380,972	+		PS417_15425	0.57	-0.6
3,380,973	-		PS417_15425	0.57	+0.6
3,380,976	+		PS417_15425	0.58	+1.0
3,380,976	+		PS417_15425	0.58	+0.3
3,380,977	-		PS417_15425	0.58	+0.3
3,381,060	+		PS417_15425	0.76	+1.7
3,381,099	-		PS417_15425	0.85	+0.5
3,381,342	-				+0.4
3,381,364	+				+0.2
3,381,467	+				-0.6
3,381,468	-				+0.7