Strain Fitness in Pseudomonas simiae WCS417 around PS417_13345

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,932,686	-		PS417_13340	0.15	+2.1
2,932,932	+		PS417_13340	0.37	+0.8
2,933,050	+		PS417_13340	0.47	+0.6
2,933,163	+		PS417_13340	0.57	+1.3
2,933,164	-		PS417_13340	0.57	-1.9
2,933,164	-		PS417_13340	0.57	-0.0
2,933,167	+		PS417_13340	0.57	+0.3
2,933,167	+		PS417_13340	0.57	+0.1
2,933,168	-		PS417_13340	0.57	-1.0
2,933,168	-		PS417_13340	0.57	-0.5
2,933,168	-		PS417_13340	0.57	-0.1
2,933,311	+				+2.7
2,933,831	+		PS417_13345	0.11	-1.9
2,934,311	+		PS417_13345	0.46	-2.1
2,934,586	+		PS417_13345	0.66	-1.2
2,934,586	+		PS417_13345	0.66	+0.6
2,934,735	-		PS417_13345	0.77	-0.4
2,935,434	-		PS417_13350	0.41	-0.7
2,935,540	+		PS417_13350	0.54	-0.4
2,935,541	-		PS417_13350	0.54	-0.9
2,935,777	+		PS417_13350	0.82	+0.5
2,935,778	-		PS417_13350	0.82	+1.2
2,935,796	+		PS417_13350	0.84	-0.3
2,935,796	+		PS417_13350	0.84	-0.0
2,935,797	-		PS417_13350	0.85	-1.4
2,935,996	+				+0.3
2,935,996	+				+1.0
2,935,996	+				+0.2
2,935,996	+				+0.1
2,935,996	+				-0.4
2,935,996	+				+0.8
2,935,996	+				+0.7
2,935,996	+				+0.9
2,935,997	-				+0.2
2,935,997	-				-0.7
2,935,997	-				+2.6
2,935,997	-				+1.1
2,935,998	+				-1.2