Strain Fitness in Pseudomonas simiae WCS417 around PS417_12405

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,698,040	+		PS417_12400	0.47	-1.3
2,698,108	-		PS417_12400	0.53	-1.4
2,698,346	+		PS417_12400	0.76	-3.5
2,698,347	-		PS417_12400	0.76	+4.2
2,698,347	-		PS417_12400	0.76	-1.2
2,698,347	-		PS417_12400	0.76	-1.5
2,698,425	-		PS417_12400	0.84	-0.9
2,698,555	+				-0.4
2,698,555	+				-0.1
2,698,556	-				+1.5
2,698,556	-				-0.0
2,698,596	+				+0.2
2,698,597	-				-0.0
2,698,774	+				-0.3
2,698,774	+				-0.9
2,698,929	+		PS417_12405	0.24	+0.5
2,698,929	+		PS417_12405	0.24	+0.5
2,698,930	-		PS417_12405	0.24	-0.5
2,698,930	-		PS417_12405	0.24	-1.4
2,699,454	-				+0.4
2,699,486	-				-0.8
2,699,486	-				-0.3
2,699,508	-				-0.3
2,699,508	-				+0.2
2,699,530	-				-1.0
2,699,829	+				+0.1
2,699,858	-				+3.0
2,699,858	-				+0.8
2,699,858	-				-0.3
2,699,903	-				+0.9
2,699,990	+		PS417_12415	0.10	-0.4
2,700,073	+		PS417_12415	0.18	+0.1
2,700,341	-		PS417_12415	0.42	-0.4
2,700,341	-		PS417_12415	0.42	+0.3
2,700,341	-		PS417_12415	0.42	-2.1
2,700,389	+		PS417_12415	0.47	-0.6
2,700,390	-		PS417_12415	0.47	-0.7
2,700,390	-		PS417_12415	0.47	-0.4
2,700,399	+		PS417_12415	0.47	-0.7
2,700,399	+		PS417_12415	0.47	-0.1
2,700,399	+		PS417_12415	0.47	-0.2
2,700,399	+		PS417_12415	0.47	+1.7
2,700,399	+		PS417_12415	0.47	-0.1
2,700,399	+		PS417_12415	0.47	+0.2
2,700,400	-		PS417_12415	0.48	-0.3
2,700,400	-				+1.7
2,700,400	-		PS417_12415	0.48	+0.7