Strain Fitness in Pseudomonas simiae WCS417 around PS417_11840

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,575,515	-		PS417_11835	0.38	-2.5
2,575,570	-		PS417_11835	0.43	+1.5
2,575,589	+		PS417_11835	0.44	-0.3
2,575,718	+		PS417_11835	0.55	+0.2
2,575,719	-		PS417_11835	0.55	+0.1
2,575,887	-		PS417_11835	0.69	-1.0
2,576,009	+		PS417_11835	0.79	+0.1
2,576,010	-		PS417_11835	0.79	-1.7
2,576,010	-		PS417_11835	0.79	+0.5
2,576,102	+		PS417_11835	0.87	-0.8
2,576,102	+		PS417_11835	0.87	+0.9
2,576,103	-		PS417_11835	0.87	-0.4
2,576,299	-				+0.3
2,576,304	+				+0.1
2,576,305	-				+0.3
2,576,574	+		PS417_11840	0.15	+1.5
2,576,575	-		PS417_11840	0.16	-1.3
2,576,578	+				-0.6
2,576,578	+		PS417_11840	0.16	-1.4
2,576,579	-		PS417_11840	0.16	-0.1
2,576,659	+		PS417_11840	0.22	+0.1
2,576,659	+		PS417_11840	0.22	-1.3
2,576,659	+		PS417_11840	0.22	+1.6
2,576,659	+		PS417_11840	0.22	+0.5
2,576,660	-		PS417_11840	0.22	+1.6
2,576,865	+		PS417_11840	0.36	+0.9
2,576,866	-		PS417_11840	0.36	-3.0
2,576,960	-		PS417_11840	0.43	+0.8
2,577,001	-		PS417_11840	0.46	-0.6
2,577,050	+		PS417_11840	0.49	-0.1
2,577,112	-		PS417_11840	0.54	+0.7
2,577,234	+		PS417_11840	0.62	+0.6
2,577,234	+		PS417_11840	0.62	-0.5
2,577,241	-				+0.5
2,577,297	+		PS417_11840	0.67	+1.7
2,577,297	+		PS417_11840	0.67	+1.4
2,577,298	-		PS417_11840	0.67	-0.7
2,577,340	+		PS417_11840	0.70	-0.2
2,577,495	+		PS417_11840	0.81	-0.3
2,577,842	+				-0.3
2,578,196	-		PS417_11845	0.46	-0.1
2,578,196	-		PS417_11845	0.46	+0.7
2,578,196	-		PS417_11845	0.46	+0.2
2,578,199	+		PS417_11845	0.47	+0.4
2,578,200	-		PS417_11845	0.47	+0.2
2,578,200	-		PS417_11845	0.47	+0.7
2,578,399	+		PS417_11845	0.69	+1.0