Strain Fitness in Pseudomonas simiae WCS417 around PS417_09270

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
2,009,742	+				+0.3
2,009,742	+				+1.4
2,009,759	-				+0.9
2,009,789	-				-1.2
2,009,823	+				+2.6
2,009,823	+				+0.9
2,009,823	+				+0.1
2,009,824	-				-0.1
2,009,879	+				+1.9
2,009,880	-				+2.1
2,009,880	-				-0.9
2,010,248	-				+0.4
2,010,373	+				+0.1
2,010,375	+				-0.7
2,010,479	-				-0.9
2,010,545	-				-0.2
2,010,665	-		PS417_09270	0.12	+0.4
2,010,803	-		PS417_09270	0.21	-1.8
2,010,811	+		PS417_09270	0.21	+0.5
2,010,811	+		PS417_09270	0.21	+1.4
2,010,812	-		PS417_09270	0.21	+0.1
2,010,952	+				-0.6
2,011,127	-		PS417_09270	0.41	+0.0
2,011,186	-		PS417_09270	0.45	+0.9
2,011,186	-		PS417_09270	0.45	+0.2
2,011,186	-		PS417_09270	0.45	-0.3
2,011,248	+		PS417_09270	0.49	+1.4
2,011,303	+		PS417_09270	0.52	-0.9
2,011,304	-		PS417_09270	0.53	-0.0
2,011,576	+		PS417_09270	0.70	-0.0
2,011,645	+		PS417_09270	0.74	+0.4
2,011,645	+		PS417_09270	0.74	+2.4
2,012,078	+				-0.4
2,012,078	+				+0.3
2,012,225	-				+1.6
2,012,299	+		PS417_09275	0.11	-0.1
2,012,299	+		PS417_09275	0.11	-2.2
2,012,299	+				-1.1
2,012,299	+		PS417_09275	0.11	-0.9
2,012,299	+		PS417_09275	0.11	-1.2
2,012,300	-		PS417_09275	0.11	-0.5
2,012,319	+		PS417_09275	0.12	-0.3
2,012,320	-		PS417_09275	0.12	-3.0
2,012,564	-		PS417_09275	0.24	-0.3
2,012,743	+		PS417_09275	0.33	-0.3
2,012,744	-		PS417_09275	0.33	-1.5
2,012,903	-		PS417_09275	0.41	-0.1
2,013,022	+		PS417_09275	0.47	+0.4
2,013,055	+		PS417_09275	0.48	-2.1
2,013,055	+		PS417_09275	0.48	+0.6
2,013,055	+		PS417_09275	0.48	+2.5