Strain Fitness in Pseudomonas simiae WCS417 around PS417_09205

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,999,418	-				-0.7
1,999,426	+				-0.4
1,999,426	+				-0.9
1,999,427	-				-0.4
1,999,446	-				+1.5
1,999,642	+		PS417_09200	0.20	-3.2
1,999,643	-		PS417_09200	0.20	+0.1
1,999,811	+		PS417_09200	0.38	+0.3
1,999,943	-		PS417_09200	0.52	-0.4
1,999,943	-		PS417_09200	0.52	-0.3
2,000,452	-				-0.6
2,000,563	+		PS417_09205	0.23	-0.2
2,000,563	+		PS417_09205	0.23	-0.0
2,000,572	+		PS417_09205	0.24	-0.7
2,000,572	+		PS417_09205	0.24	-1.6
2,000,572	+		PS417_09205	0.24	-1.6
2,000,572	+		PS417_09205	0.24	+0.1
2,000,573	-		PS417_09205	0.24	+0.4
2,000,617	+		PS417_09205	0.30	+0.1
2,000,700	+		PS417_09205	0.41	+0.5
2,000,898	+		PS417_09205	0.66	-0.6
2,000,957	-		PS417_09205	0.74	-0.4
2,000,957	-		PS417_09205	0.74	+1.2
2,001,112	+				+0.1
2,001,112	+				+1.0
2,001,112	+				-0.9
2,001,113	-				+0.2
2,001,113	-				+0.7
2,001,131	+				+0.4
2,001,235	+				-0.4
2,001,236	-				-0.6
2,001,328	-				+0.7
2,001,328	-				-0.6
2,001,365	-		PS417_09210	0.12	-0.8
2,001,369	+		PS417_09210	0.13	-1.8
2,001,681	-		PS417_09210	0.71	-2.8
2,001,802	-				-0.3
2,001,829	+				-0.7
2,001,928	+				-0.4
2,002,022	+				-1.3
2,002,022	+				+0.2
2,002,023	-				-0.8
2,002,086	-		PS417_09215	0.13	-0.6
2,002,086	-		PS417_09215	0.13	-1.4