Strain Fitness in Pseudomonas simiae WCS417 around PS417_09075

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,974,994	+		PS417_09070	0.64	-1.2
1,974,994	+		PS417_09070	0.64	+0.1
1,974,995	-		PS417_09070	0.64	+0.1
1,975,037	+		PS417_09070	0.67	-0.8
1,975,043	-		PS417_09070	0.68	-1.4
1,975,159	+		PS417_09070	0.76	+0.1
1,975,212	+		PS417_09070	0.80	-1.9
1,975,213	-		PS417_09070	0.80	-1.2
1,975,269	+		PS417_09070	0.84	+0.2
1,975,269	+		PS417_09070	0.84	+0.6
1,975,296	-		PS417_09070	0.85	+0.8
1,975,498	+				+0.3
1,975,689	-				-1.2
1,975,794	-				+0.7
1,975,944	-		PS417_09075	0.17	+2.1
1,975,944	-		PS417_09075	0.17	+0.0
1,976,207	+		PS417_09075	0.30	+0.7
1,976,208	-		PS417_09075	0.30	-0.5
1,976,208	-		PS417_09075	0.30	+0.4
1,976,208	-		PS417_09075	0.30	+0.1
1,976,208	-				+1.7
1,976,208	-		PS417_09075	0.30	+1.7
1,976,208	-		PS417_09075	0.30	-0.2
1,976,390	-		PS417_09075	0.39	-0.3
1,976,399	+		PS417_09075	0.40	+0.1
1,976,476	+		PS417_09075	0.44	+1.7
1,977,066	+		PS417_09075	0.74	+0.7
1,977,067	-		PS417_09075	0.74	+0.2
1,977,194	+		PS417_09075	0.80	+0.8
1,977,498	+				+0.3
1,977,558	+				-0.7
1,977,559	-				+1.7
1,977,688	+				-0.1
1,977,831	-		PS417_09080	0.26	-0.4
1,977,831	-		PS417_09080	0.26	-1.3
1,977,831	-		PS417_09080	0.26	+1.5
1,977,831	-		PS417_09080	0.26	-0.3
1,977,831	-		PS417_09080	0.26	-0.6
1,977,898	-		PS417_09080	0.34	+0.2
1,977,927	+				-0.6
1,977,927	+				-0.3
1,978,038	+		PS417_09080	0.51	-0.5
1,978,074	+		PS417_09080	0.56	-1.8
1,978,075	-		PS417_09080	0.56	+0.1
1,978,075	-		PS417_09080	0.56	-0.7
1,978,141	+		PS417_09080	0.64	-1.2
1,978,350	+		PS417_09080	0.90	-1.1
1,978,350	+		PS417_09080	0.90	+0.4
1,978,351	-				-0.1
1,978,391	+				+0.9
1,978,456	+				+0.8
1,978,457	-				-1.5