Strain Fitness in Pseudomonas simiae WCS417 around PS417_08310

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,819,794	+				-0.5
1,819,795	-				+0.8
1,819,795	-				+0.8
1,820,010	-		PS417_08305	0.12	-0.1
1,820,019	+		PS417_08305	0.14	-1.3
1,820,225	+		PS417_08305	0.43	+0.3
1,820,225	+		PS417_08305	0.43	+1.2
1,820,225	+		PS417_08305	0.43	+1.5
1,820,225	+		PS417_08305	0.43	-1.1
1,820,226	-		PS417_08305	0.44	+1.9
1,820,403	-		PS417_08305	0.69	+0.1
1,820,555	-				+1.4
1,820,727	-				-1.2
1,820,727	-				-0.2
1,820,779	-				+0.4
1,820,897	+		PS417_08310	0.15	+2.2
1,820,898	-		PS417_08310	0.15	+1.2
1,820,980	-		PS417_08310	0.23	-2.3
1,821,464	+		PS417_08310	0.69	+0.6
1,821,577	+		PS417_08310	0.80	+0.4
1,821,578	-		PS417_08310	0.80	-0.5
1,821,904	-				-1.0
1,821,904	-				-0.4
1,821,907	+				-1.6
1,821,907	+				+1.2
1,821,907	+				+0.5
1,821,907	+				-1.9
1,821,907	+				-2.8
1,821,907	+				+0.9
1,821,907	+				+0.1
1,821,908	-				+0.5
1,821,908	-				-0.0
1,821,908	-				+0.3
1,821,908	-				-3.3
1,821,908	-				-0.6
1,821,911	+				-0.2
1,821,911	+				-0.1
1,821,911	+				+0.3
1,821,912	-				+1.0
1,821,912	-				+0.7
1,821,912	-				-0.9
1,821,950	+				-0.2
1,821,951	-				+0.9
1,821,951	-				-0.3
1,821,951	-				-1.1
1,821,969	-				-2.6
1,822,019	+				-0.9
1,822,019	+				-0.2
1,822,154	-		PS417_08315	0.55	+0.2
1,822,158	+		PS417_08315	0.57	-0.6
1,822,158	+		PS417_08315	0.57	-1.5
1,822,249	+				+0.7
1,822,249	+				+0.3
1,822,249	+				+0.7
1,822,249	+		PS417_08315	0.89	-2.6
1,822,250	-		PS417_08315	0.90	-0.0
1,822,250	-		PS417_08315	0.90	+0.3
1,822,250	-		PS417_08315	0.90	+0.7
1,822,252	-				+0.7
1,822,372	+				+0.8
1,822,372	+				+0.1
1,822,373	-				-0.0
1,822,379	-				+0.2
1,822,573	-		PS417_08320	0.33	+1.9