Strain Fitness in Pseudomonas simiae WCS417 around PS417_08205

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,796,740	-				-1.1
1,796,740	-				-0.3
1,796,740	-				-0.4
1,796,743	+				+0.1
1,796,744	-				-3.5
1,796,812	+				+2.2
1,796,812	+				-0.2
1,796,868	-		PS417_08200	0.10	+0.3
1,797,094	+		PS417_08200	0.39	-0.0
1,797,271	-		PS417_08200	0.61	-2.6
1,797,284	-		PS417_08200	0.62	-0.9
1,797,285	+		PS417_08200	0.63	+0.7
1,797,417	+		PS417_08200	0.79	+1.7
1,797,486	+		PS417_08200	0.88	-3.4
1,797,563	+				+0.1
1,797,589	-				+0.8
1,797,801	-		PS417_08205	0.27	-0.5
1,797,973	+		PS417_08205	0.54	-1.6
1,798,026	+		PS417_08205	0.62	-2.3
1,798,036	+		PS417_08205	0.64	-1.5
1,798,088	-		PS417_08205	0.72	-2.2
1,798,088	-		PS417_08205	0.72	-1.7
1,798,278	+				+1.7
1,798,278	+				-0.8
1,798,471	+		PS417_08210	0.16	-1.3
1,798,886	-		PS417_08210	0.58	-0.9