Strain Fitness in Pseudomonas simiae WCS417 around PS417_07155

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,580,872	-		PS417_07150	0.14	+1.2
1,580,875	+		PS417_07150	0.14	+1.7
1,580,875	+		PS417_07150	0.14	+0.0
1,580,875	+		PS417_07150	0.14	+0.2
1,581,216	+		PS417_07150	0.46	+1.6
1,581,216	+		PS417_07150	0.46	-1.6
1,581,217	-		PS417_07150	0.46	+0.6
1,581,357	+		PS417_07150	0.59	-0.6
1,581,358	-		PS417_07150	0.59	-0.3
1,581,358	-		PS417_07150	0.59	+0.1
1,581,405	+		PS417_07150	0.64	+0.1
1,581,405	+		PS417_07150	0.64	+0.0
1,581,406	-				-1.3
1,581,406	-		PS417_07150	0.64	-0.1
1,581,406	-		PS417_07150	0.64	+0.5
1,581,435	+		PS417_07150	0.66	-0.3
1,581,460	+		PS417_07150	0.69	+1.4
1,581,461	-		PS417_07150	0.69	+0.5
1,581,464	+		PS417_07150	0.69	+0.5
1,581,484	-		PS417_07150	0.71	-2.6
1,581,561	+		PS417_07150	0.78	-0.1
1,581,561	+		PS417_07150	0.78	-0.7
1,581,576	+		PS417_07150	0.80	+2.3
1,581,906	+		PS417_07155	0.13	-0.9
1,581,976	+		PS417_07155	0.27	-0.6
1,581,976	+		PS417_07155	0.27	-2.1
1,582,217	-		PS417_07155	0.78	+0.4
1,582,217	-		PS417_07155	0.78	-2.0
1,582,217	-				+2.9
1,582,217	-		PS417_07155	0.78	-0.6
1,582,217	-		PS417_07155	0.78	+0.8
1,582,217	-		PS417_07155	0.78	-0.5
1,582,331	+				-2.7
1,582,331	+				+1.2
1,582,331	+				-2.4
1,582,331	+				-1.3
1,582,332	-				-0.9
1,582,332	-				-0.9
1,582,332	-				-0.4
1,582,493	+		PS417_07160	0.29	-2.1
1,582,493	+		PS417_07160	0.29	-0.4
1,582,589	+		PS417_07160	0.46	-2.6
1,582,589	+		PS417_07160	0.46	-0.2
1,582,589	+		PS417_07160	0.46	+0.4
1,582,589	+		PS417_07160	0.46	-0.0
1,582,589	+		PS417_07160	0.46	+0.2
1,582,589	+		PS417_07160	0.46	+0.3
1,582,590	-		PS417_07160	0.46	+0.6
1,582,590	-		PS417_07160	0.46	-0.4
1,582,590	-		PS417_07160	0.46	+0.1
1,582,590	-		PS417_07160	0.46	-2.0
1,582,594	+		PS417_07160	0.47	-1.1
1,582,594	+		PS417_07160	0.47	+0.0
1,582,594	+		PS417_07160	0.47	-0.8
1,582,599	-		PS417_07160	0.48	-0.7
1,582,599	-		PS417_07160	0.48	-0.4
1,582,599	-		PS417_07160	0.48	+3.0
1,582,599	-		PS417_07160	0.48	-1.8
1,582,901	+				-0.2
1,583,126	+				-2.7
1,583,127	-				+0.7
1,583,178	+				-0.9