Strain Fitness in Pseudomonas simiae WCS417 around PS417_06130

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,357,605	+				-0.7
1,357,606	-		PS417_06120	0.10	+0.2
1,357,612	-		PS417_06120	0.12	-0.1
1,357,623	+		PS417_06120	0.16	-0.4
1,357,642	-		PS417_06120	0.23	-0.5
1,357,642	-		PS417_06120	0.23	+0.9
1,357,657	-		PS417_06120	0.29	-0.1
1,357,680	+		PS417_06120	0.37	-0.0
1,357,680	+		PS417_06120	0.37	-0.8
1,357,681	-		PS417_06120	0.38	-1.2
1,357,731	+		PS417_06120	0.56	+0.7
1,357,732	-		PS417_06120	0.56	+0.9
1,357,739	+		PS417_06120	0.59	-1.8
1,357,740	-		PS417_06120	0.59	+0.8
1,357,874	+				-0.1
1,358,063	+		PS417_06125	0.28	+1.0
1,358,063	+				-1.3
1,358,063	+		PS417_06125	0.28	+0.8
1,358,064	-		PS417_06125	0.28	-0.7
1,358,064	-		PS417_06125	0.28	+0.9
1,358,064	-		PS417_06125	0.28	+1.2
1,358,577	+				-0.3
1,358,588	-				+2.4
1,358,686	+		PS417_06130	0.21	-0.8
1,358,687	-		PS417_06130	0.21	-2.1
1,358,694	-		PS417_06130	0.23	-0.4
1,358,694	-		PS417_06130	0.23	-0.5
1,358,763	+		PS417_06130	0.40	-0.1
1,358,763	+		PS417_06130	0.40	-0.2
1,358,764	-		PS417_06130	0.40	-0.7
1,358,764	-		PS417_06130	0.40	+1.0
1,358,907	+		PS417_06130	0.76	-0.4
1,359,051	+				-0.5
1,359,051	+				-0.3
1,359,052	-				-0.4
1,359,052	-				-0.3
1,359,412	-		PS417_06135	0.14	+0.0
1,359,423	+		PS417_06135	0.15	-1.1
1,359,741	+		PS417_06135	0.27	-1.4
1,359,741	+		PS417_06135	0.27	+0.1
1,359,742	-		PS417_06135	0.27	-1.9
1,359,742	-		PS417_06135	0.27	-0.8
1,359,909	+		PS417_06135	0.34	-0.2
1,359,910	-		PS417_06135	0.34	-1.5
1,359,910	-		PS417_06135	0.34	+0.6