Strain Fitness in Pseudomonas simiae WCS417 around PS417_05920

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,314,895	+		PS417_05915	0.56	+0.2
1,314,921	+		PS417_05915	0.57	+0.3
1,314,964	+		PS417_05915	0.59	+1.1
1,314,964	+		PS417_05915	0.59	-1.5
1,314,964	+		PS417_05915	0.59	-0.3
1,315,001	-		PS417_05915	0.61	-1.6
1,315,248	+		PS417_05915	0.75	+0.8
1,315,249	-		PS417_05915	0.75	-1.5
1,315,249	-		PS417_05915	0.75	-0.6
1,315,249	-		PS417_05915	0.75	-0.9
1,315,250	+		PS417_05915	0.75	+0.3
1,315,250	+		PS417_05915	0.75	-1.8
1,315,251	-		PS417_05915	0.75	-0.2
1,315,251	-		PS417_05915	0.75	+0.7
1,315,294	+		PS417_05915	0.77	+0.9
1,315,295	-		PS417_05915	0.77	+0.9
1,315,295	-		PS417_05915	0.77	-0.1
1,315,498	+		PS417_05915	0.88	+0.9
1,315,499	-		PS417_05915	0.88	-0.0
1,315,615	+				-0.3
1,315,616	-				-0.7
1,315,712	+				-0.2
1,315,743	+				+2.2
1,315,744	-				+1.2
1,315,744	-				-1.1
1,315,744	-				-1.5
1,315,816	+				+0.4
1,315,832	-				-0.2
1,315,832	-				-0.5
1,315,832	-				+0.2
1,315,908	-				-0.7
1,315,962	+		PS417_05920	0.13	-1.8
1,316,281	+		PS417_05920	0.35	+0.0
1,316,329	+		PS417_05920	0.38	-1.3
1,316,330	-		PS417_05920	0.38	+1.1
1,316,330	-		PS417_05920	0.38	+0.7
1,316,386	+		PS417_05920	0.42	-1.6
1,316,386	+		PS417_05920	0.42	+0.3
1,316,387	-		PS417_05920	0.42	+0.0
1,316,706	-		PS417_05920	0.65	-2.4
1,316,758	+		PS417_05920	0.68	-1.1
1,316,758	+		PS417_05920	0.68	+1.2
1,316,759	-		PS417_05920	0.69	-1.3
1,316,830	+		PS417_05920	0.74	+0.3
1,316,831	-		PS417_05920	0.74	-0.6
1,316,886	+		PS417_05920	0.77	+0.7
1,316,887	-		PS417_05920	0.78	-1.5
1,316,887	-		PS417_05920	0.78	+0.3
1,317,144	+				+0.2
1,317,172	-				-2.4
1,317,221	-				-1.7
1,317,386	-				+0.5
1,317,430	+				-2.6
1,317,430	+				-0.4
1,317,434	-				+0.5
1,317,434	-				-0.1
1,317,434	-				-0.1
1,317,434	-				-1.6
1,317,656	-		PS417_05925	0.34	-0.3
1,317,749	-		PS417_05925	0.45	-1.1
1,317,759	+		PS417_05925	0.46	+0.3
1,317,923	-		PS417_05925	0.67	+0.4
1,318,102	+		PS417_05925	0.89	-2.0
1,318,172	+				+0.1
1,318,173	-				+0.6
1,318,173	-				-1.7
1,318,173	-				-0.9
1,318,173	-				+0.3
1,318,173	-				+0.5