Strain Fitness in Pseudomonas simiae WCS417 around PS417_05905

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,310,621	-		PS417_05895	0.89	+0.2
1,310,673	-				-0.3
1,310,673	-				+0.5
1,311,193	-		PS417_05900	0.75	+0.1
1,311,193	-		PS417_05900	0.75	-2.2
1,311,344	-				-0.2
1,311,474	+				-1.3
1,311,474	+				-0.2
1,311,480	+				-2.9
1,311,485	+				-0.5
1,311,485	+				-1.3
1,311,485	+				-1.5
1,311,485	+				+2.0
1,311,485	+				-0.2
1,311,485	+				-0.2
1,311,486	-				-0.3
1,311,570	+				-0.2
1,311,571	-				+0.0
1,311,571	-				+0.6
1,311,612	-				-0.1
1,311,619	-		PS417_05905	0.11	-1.0
1,311,746	+		PS417_05905	0.79	-0.2
1,311,874	-				-1.0
1,311,893	-				-0.7
1,311,897	-				-0.6
1,311,923	-				-0.6
1,311,923	-				-0.4
1,311,928	+				+0.7
1,311,928	+				-0.6
1,311,928	+				-0.2
1,311,928	+				-1.7
1,311,929	-				-1.8
1,311,929	-				-0.2
1,311,929	-				-1.5
1,312,239	-		PS417_05910	0.22	-2.2
1,312,262	+		PS417_05910	0.23	-1.3
1,312,262	+		PS417_05910	0.23	-1.9
1,312,263	-		PS417_05910	0.23	-1.0
1,312,267	-		PS417_05910	0.23	-0.5
1,312,297	+		PS417_05910	0.25	-1.3
1,312,297	+		PS417_05910	0.25	-0.6
1,312,297	+		PS417_05910	0.25	-1.3
1,312,298	-		PS417_05910	0.25	-0.2
1,312,303	+		PS417_05910	0.26	-1.5
1,312,304	-		PS417_05910	0.26	+0.1
1,312,383	-		PS417_05910	0.31	-1.8
1,312,460	-		PS417_05910	0.35	-0.6
1,312,480	+		PS417_05910	0.37	-1.3
1,312,480	+		PS417_05910	0.37	-1.4
1,312,658	+		PS417_05910	0.48	-2.0
1,312,659	-		PS417_05910	0.48	-1.5