Strain Fitness in Pseudomonas simiae WCS417 around PS417_00580

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
115,173	+		PS417_00575	0.11	+0.5
115,173	+		PS417_00575	0.11	+0.3
115,173	+		PS417_00575	0.11	-0.8
115,174	-		PS417_00575	0.11	-0.3
115,176	+		PS417_00575	0.11	-1.3
115,176	+		PS417_00575	0.11	-0.8
115,177	-		PS417_00575	0.11	-0.3
115,177	-		PS417_00575	0.11	-1.0
115,310	+		PS417_00575	0.26	-1.4
115,311	-		PS417_00575	0.26	+1.0
115,311	-		PS417_00575	0.26	+1.6
115,344	-		PS417_00575	0.30	+1.5
115,383	+		PS417_00575	0.34	+1.0
115,384	-		PS417_00575	0.34	+0.2
115,540	-		PS417_00575	0.52	+0.3
115,540	-		PS417_00575	0.52	+0.4
115,543	+		PS417_00575	0.52	+0.1
115,544	-		PS417_00575	0.52	-0.8
115,601	+		PS417_00575	0.58	+1.7
115,771	-		PS417_00575	0.77	+0.5
115,975	+				-0.6
115,976	-				-0.3
116,088	+				+1.3
116,128	+				-0.7
116,129	-				-2.0
116,370	+		PS417_00580	0.20	-1.7
116,503	-		PS417_00580	0.31	-1.3
116,616	+		PS417_00580	0.41	+0.8
116,950	-		PS417_00580	0.69	-0.7
116,950	-		PS417_00580	0.69	-1.0
116,950	-		PS417_00580	0.69	-2.0
117,309	+				+0.6
117,309	+				-1.0
117,309	+				+0.0
117,315	+				-1.6
117,316	-				+0.1
117,520	-		PS417_00585	0.16	+0.4
117,522	+		PS417_00585	0.16	+0.9
117,522	+				+0.1
117,523	-		PS417_00585	0.16	-1.1
117,705	+		PS417_00585	0.31	+0.0
117,759	+		PS417_00585	0.35	-1.2
118,000	-		PS417_00585	0.55	-0.3
118,000	-		PS417_00585	0.55	+0.3
118,125	-		PS417_00585	0.65	-0.0
118,182	-		PS417_00585	0.70	-1.0