Strain Fitness in Pseudomonas simiae WCS417 around PS417_05160

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
1,144,598	-				+1.2
1,144,619	-				+0.1
1,144,619	-				-1.0
1,144,666	+				+1.2
1,144,667	-				-0.0
1,144,667	-				-0.3
1,144,667	-				+0.7
1,144,779	+				-0.0
1,144,779	+				-0.3
1,144,795	+				+0.1
1,144,795	+				-0.1
1,145,043	+		PS417_05155	0.67	+0.7
1,145,044	-		PS417_05155	0.67	+0.5
1,145,189	-				-0.4
1,145,189	-				+0.7
1,145,498	+		PS417_05160	0.75	-1.6
1,145,498	+		PS417_05160	0.75	-1.2
1,145,581	+				+0.8
1,145,581	+				-0.0
1,145,581	+				+0.3
1,145,582	-				-1.0
1,145,582	-				-0.3
1,145,583	+				-0.8
1,145,583	+				-0.2
1,145,583	+				+0.9
1,145,583	+				+0.2
1,145,583	+				+0.5
1,145,583	+				+0.1
1,145,584	-				-0.2
1,145,584	-				-0.4
1,145,584	-				+0.7
1,145,584	-				-0.7
1,145,586	-				-2.1
1,145,586	-				+0.4
1,145,586	-				-1.8
1,145,586	-				-0.6
1,146,300	+		PS417_05165	0.42	+1.8
1,146,301	-		PS417_05165	0.42	-0.3
1,146,301	-		PS417_05165	0.42	-0.2
1,146,411	+		PS417_05165	0.50	+0.7
1,146,412	-		PS417_05165	0.50	+0.2