Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03665 and PS417_03670 are separated by 0 nucleotides PS417_03670 and PS417_03675 are separated by 3 nucleotides PS417_03675 and PS417_03680 are separated by 111 nucleotides PS417_03680 and PS417_03685 overlap by 4 nucleotides
PS417_03665: PS417_03665 - deoxyribodipyrimidine photolyase, at 829,575 to 831,020
_03665
PS417_03670: PS417_03670 - MerR family transcriptional regulator, at 831,021 to 831,950
_03670
PS417_03675: PS417_03675 - hypothetical protein, at 831,954 to 832,913
_03675
PS417_03680: PS417_03680 - hypothetical protein, at 833,025 to 833,240
_03680
PS417_03685: PS417_03685 - FAD-dependent oxidoreductase, at 833,237 to 834,223
_03685
Position (kb) 831
832
833 Strain fitness (log2 ratio) -2
-1
0
1
2 at 831.022 kb on + strand at 831.105 kb on + strand at 831.132 kb on + strand, within PS417_03670 at 831.217 kb on + strand, within PS417_03670 at 831.218 kb on - strand, within PS417_03670 at 831.218 kb on - strand, within PS417_03670 at 831.408 kb on - strand, within PS417_03670 at 831.416 kb on - strand, within PS417_03670 at 831.749 kb on + strand, within PS417_03670 at 831.756 kb on + strand, within PS417_03670 at 831.756 kb on + strand, within PS417_03670 at 831.756 kb on + strand, within PS417_03670 at 831.756 kb on + strand, within PS417_03670 at 831.757 kb on - strand, within PS417_03670 at 831.757 kb on - strand, within PS417_03670 at 831.933 kb on + strand at 831.955 kb on + strand at 832.018 kb on + strand at 832.018 kb on + strand at 832.333 kb on + strand, within PS417_03675 at 832.333 kb on + strand, within PS417_03675 at 832.333 kb on + strand, within PS417_03675 at 832.334 kb on - strand, within PS417_03675 at 832.340 kb on - strand, within PS417_03675 at 832.513 kb on + strand, within PS417_03675 at 832.514 kb on - strand, within PS417_03675 at 832.514 kb on - strand, within PS417_03675 at 832.559 kb on - strand, within PS417_03675 at 832.652 kb on - strand, within PS417_03675 at 832.913 kb on + strand at 832.974 kb on + strand at 832.974 kb on + strand at 833.332 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Polymyxin B sulfate 0.003 mg/ml remove 831,022 + +2.7 831,105 + -0.3 831,132 + PS417_03670 0.12 +0.2 831,217 + PS417_03670 0.21 +0.1 831,218 - PS417_03670 0.21 -0.5 831,218 - PS417_03670 0.21 +0.7 831,408 - PS417_03670 0.42 +0.1 831,416 - PS417_03670 0.42 +0.5 831,749 + PS417_03670 0.78 +2.2 831,756 + PS417_03670 0.79 -0.4 831,756 + PS417_03670 0.79 +0.2 831,756 + PS417_03670 0.79 +1.5 831,756 + PS417_03670 0.79 -0.3 831,757 - PS417_03670 0.79 -1.7 831,757 - PS417_03670 0.79 -0.1 831,933 + -0.5 831,955 + -1.9 832,018 + +0.6 832,018 + +0.6 832,333 + PS417_03675 0.39 -0.6 832,333 + PS417_03675 0.39 -0.7 832,333 + PS417_03675 0.39 +0.4 832,334 - PS417_03675 0.40 +0.2 832,340 - PS417_03675 0.40 +0.8 832,513 + PS417_03675 0.58 -1.0 832,514 - PS417_03675 0.58 -0.6 832,514 - PS417_03675 0.58 +1.6 832,559 - PS417_03675 0.63 +0.6 832,652 - PS417_03675 0.73 +0.3 832,913 + +0.2 832,974 + -2.5 832,974 + -0.7 833,332 - -0.8
Or see this region's nucleotide sequence