Strain Fitness in Pseudomonas simiae WCS417 around PS417_28425

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
6,134,092	+		PS417_28415	0.62	-1.4
6,134,092	+		PS417_28415	0.62	-2.3
6,134,092	+		PS417_28415	0.62	-0.0
6,134,093	-		PS417_28415	0.63	-0.6
6,134,100	+		PS417_28415	0.63	+0.3
6,134,100	+		PS417_28415	0.63	+2.4
6,134,101	-		PS417_28415	0.63	+0.4
6,134,101	-		PS417_28415	0.63	+0.4
6,134,226	-		PS417_28415	0.77	-0.1
6,134,345	+		PS417_28415	0.90	-0.6
6,134,346	-		PS417_28415	0.90	-0.0
6,134,448	+				-0.0
6,135,085	+				-1.4
6,135,085	+				+2.5
6,135,130	+				+1.1
6,135,342	+		PS417_28425	0.40	-1.4
6,135,363	+		PS417_28425	0.44	-0.7
6,135,363	+		PS417_28425	0.44	-0.5
6,135,364	-		PS417_28425	0.44	-0.0
6,135,586	+		PS417_28425	0.79	+0.3
6,135,646	-		PS417_28425	0.89	-1.2
6,135,761	+				-0.9
6,135,762	-				-0.3
6,135,762	-				+0.8
6,135,762	-				+2.5
6,135,762	-				-0.4
6,135,766	+				+0.2
6,135,967	+				-0.1
6,136,002	+				-1.1
6,136,002	+				+0.2
6,136,017	+				+3.4
6,136,050	+				-2.2
6,136,081	-				+1.5
6,136,272	+				-1.8
6,136,272	+				-0.6
6,136,272	+				+2.8
6,136,273	-				-2.1
6,136,319	-				-0.6
6,136,329	+				-0.2
6,136,329	+				-0.4
6,136,466	-		PS417_28430	0.12	-0.7
6,136,466	-		PS417_28430	0.12	-0.2
6,136,570	-		PS417_28430	0.13	-0.4
6,136,573	+		PS417_28430	0.13	-0.2
6,136,573	+		PS417_28430	0.13	-2.8
6,136,638	-		PS417_28430	0.15	-0.6
6,136,638	-		PS417_28430	0.15	-2.7