Strain Fitness in Pseudomonas simiae WCS417 around PS417_27735

Experiment: R2A with Polymyxin B sulfate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.003 mg/ml
5,980,646	+		PS417_27730	0.54	+0.2
5,980,646	+		PS417_27730	0.54	-0.2
5,980,647	-		PS417_27730	0.54	+0.7
5,980,727	+		PS417_27730	0.59	-0.7
5,980,728	-		PS417_27730	0.59	+0.1
5,980,728	-		PS417_27730	0.59	-1.0
5,980,728	-		PS417_27730	0.59	-0.2
5,980,743	-		PS417_27730	0.60	-0.4
5,980,794	+		PS417_27730	0.64	-0.5
5,980,794	+		PS417_27730	0.64	+0.2
5,980,795	-		PS417_27730	0.64	+1.4
5,980,892	+		PS417_27730	0.71	+0.7
5,980,892	+		PS417_27730	0.71	+0.0
5,980,892	+		PS417_27730	0.71	-0.8
5,980,892	+		PS417_27730	0.71	-0.9
5,980,892	+		PS417_27730	0.71	-0.6
5,980,892	+		PS417_27730	0.71	-0.4
5,980,892	+		PS417_27730	0.71	-0.4
5,981,037	-		PS417_27730	0.81	+0.1
5,981,113	+		PS417_27730	0.86	-0.0
5,981,139	+		PS417_27730	0.88	-0.5
5,981,216	+				+0.1
5,981,216	+				+0.4
5,981,217	-				+1.0
5,981,382	-				+0.2
5,981,382	-				+0.2
5,981,386	-				-0.0
5,981,550	+				+1.8
5,981,551	-		PS417_27735	0.12	-1.2
5,981,551	-		PS417_27735	0.12	+1.5
5,981,620	+		PS417_27735	0.16	-0.1
5,981,620	+		PS417_27735	0.16	-0.1
5,981,620	+		PS417_27735	0.16	-1.7
5,981,620	+		PS417_27735	0.16	-0.3
5,981,620	+		PS417_27735	0.16	-0.8
5,981,621	-		PS417_27735	0.16	+1.1
5,981,621	-		PS417_27735	0.16	-1.0
5,981,621	-		PS417_27735	0.16	-1.2
5,981,621	-		PS417_27735	0.16	-0.0
5,981,644	-		PS417_27735	0.18	-0.2
5,981,644	-		PS417_27735	0.18	-1.4
5,981,938	+		PS417_27735	0.36	+0.2
5,981,939	-		PS417_27735	0.36	+1.1
5,981,939	-		PS417_27735	0.36	+0.6
5,982,018	+		PS417_27735	0.41	-0.9
5,982,018	+		PS417_27735	0.41	-0.4
5,982,019	-		PS417_27735	0.41	-1.2
5,982,079	-		PS417_27735	0.45	-0.4
5,982,079	-		PS417_27735	0.45	-0.9
5,982,181	+				+4.2
5,982,181	+		PS417_27735	0.52	+0.0
5,982,181	+		PS417_27735	0.52	-0.2
5,982,182	-		PS417_27735	0.52	-1.0
5,982,395	-		PS417_27735	0.65	-0.5
5,982,790	+				-1.2
5,982,791	-				-0.7
5,982,935	-				+0.8
5,983,029	-				-1.0
5,983,384	-		PS417_27740	0.31	+0.4
5,983,397	+		PS417_27740	0.32	-1.8
5,983,398	-		PS417_27740	0.32	-0.8
5,983,502	+		PS417_27740	0.42	+1.4
5,983,503	-		PS417_27740	0.42	+0.3
5,983,503	-		PS417_27740	0.42	-0.5
5,983,503	-		PS417_27740	0.42	-1.0
5,983,503	-		PS417_27740	0.42	-0.2
5,983,503	-		PS417_27740	0.42	+0.5
5,983,503	-		PS417_27740	0.42	-0.6
5,983,669	+		PS417_27740	0.56	-0.0
5,983,670	-		PS417_27740	0.56	-0.7
5,983,701	-		PS417_27740	0.59	+0.9
5,983,701	-		PS417_27740	0.59	-0.3
5,983,701	-		PS417_27740	0.59	-1.4
5,983,760	+		PS417_27740	0.64	-2.5
5,983,761	-		PS417_27740	0.64	+0.6
5,983,761	-		PS417_27740	0.64	-0.9
5,983,772	+		PS417_27740	0.65	+0.1
5,983,772	+		PS417_27740	0.65	-1.7
5,983,772	+		PS417_27740	0.65	-1.9
5,983,844	-		PS417_27740	0.71	-1.0
5,983,879	+		PS417_27740	0.75	+2.1